RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA534016" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA534016 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
507582 507582 PRJNA534016_P_NODE_1_length_9955_cov_165.904270_g0_i0 PRJNA534016 1 9955 165.90427 16515.7700785 Freshwater macrophyte associated picorna-like virus 1 2946039 Viruses Viruses 14224 0   NTclustered gi|2242598914|gb|ON125119.1| 2946039 g0 i0 92.576 1.67011551983928 9914 728 99 8 41 9948 9964 53 Freshwater macrophyte associated picorna-like virus 1 isolate P-N1_1, complete genome blastn 16626 14224 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Freshwater macrophyte associated picorna-like virus 1
1782919 1782919 PRJNA534016_P_NODE_2_length_7203_cov_16.246704_g1_i0 PRJNA534016 2 7203 16.246704 1170.25008912 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2532 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g1 i0 92.316 0.667221990837151 1783 132 67 5 5421 7201 5329 7108 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 4806 2532 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
8160293 8160293 PRJNA534016_P_NODE_18447_length_241_cov_0.916667_g18357_i0 PRJNA534016 18447 241 0.916667 2.20916747 Zebrafish picornavirus 1 2304617 Viruses Viruses 372 1.47e-98   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g18357 i0 94.583 2.98755186721992 240 13 99 0 1 240 4049 4288 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 720 372 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;