RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA533623" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA533623 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1118107 1118107 PRJNA533623_P_NODE_78941_length_193_cov_5.007576_g77160_i0 PRJNA533623 78941 193 5.007576 9.66462168 Rhizopus 4842 Fungi Fungi 307 3.2200000000000003e-79   NTclustered gi|2795784435|gb|PQ268974.1| 4846 g77160 i0 98.844 89.0932642487047 173 0 89 1 23 193 5 177 Rhizopus stolonifer isolate UJIY large subunit ribosomal RNA gene, partial sequence blastn 17195 307 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
6883639 6883639 PRJNA533623_P_NODE_19006_length_537_cov_10.430672_g17265_i0 PRJNA533623 19006 537 10.430672 56.01270864 Gamsiella multidivaricata 101098 Fungi Fungi 126 3.0599999999999998e-24   NTclustered gi|2323766941|ref|XM_051553564.1| 101098 g17265 i0 79.444 1.37988826815642 180 36 33 1 100 278 995 1174 Gamsiella multidivaricata P-loop containing nucleoside triphosphate hydrolase protein (BC939DRAFT_436081), mRNA blastn 741 126 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
20244177 20244177 PRJNA533623_P_NODE_16076_length_587_cov_674.338403_g14361_i0 PRJNA533623 16076 587 674.338403 3958.36642561 Fungi 4751 Fungi Fungi 442 2.9499999999999984e-119   NTclustered gi|658131632|emb|HF968958.1| 4874 g14361 i0 98.413 128.425894378194 252 2 93 2 329 579 2016 2266 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 75386 442 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
22794900 22794900 PRJNA533623_P_NODE_15518_length_598_cov_512.986965_g13808_i0 PRJNA533623 15518 598 512.986965 3067.6620507 Fungi 4751 Fungi Fungi 442 3.0099999999999984e-119   NTclustered gi|658131632|emb|HF968958.1| 4874 g13808 i0 98.413 83.3578595317726 252 2 93 2 340 590 2016 2266 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 49848 442 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;