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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA533623" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA533623 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3057066 3057066 PRJNA533623_P_NODE_24183_length_470_cov_4.449878_g22423_i0 PRJNA533623 24183 470 4.449878 20.9144266 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 856 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g22423 i0 99.574 1 470 1 100 1 1 470 21286 20818 Naegleria gruberi mitochondrion, complete genome blastn 470 856 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5610680 5610680 PRJNA533623_P_NODE_57845_length_262_cov_2.407960_g56065_i0 PRJNA533623 57845 262 2.40796 6.3088552 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 484 1.99e-132   NTclustered gi|11466174|ref|NC_002573.1| 5762 g56065 i0 100 3.83969465648855 262 0 100 0 1 262 17656 17917 Naegleria gruberi mitochondrion, complete genome blastn 1006 484 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10710658 10710658 PRJNA533623_P_NODE_44529_length_320_cov_8.671815_g42755_i0 PRJNA533623 44529 320 8.671815 27.749808 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 580 3.099999999999999e-161   NTclustered gi|11466174|ref|NC_002573.1| 5762 g42755 i0 99.375 1.19375 320 2 100 0 1 320 22944 23263 Naegleria gruberi mitochondrion, complete genome blastn 382 580 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13260001 13260001 PRJNA533623_P_NODE_26531_length_446_cov_3.301299_g24762_i0 PRJNA533623 26531 446 3.301299 14.72379354 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 54.7 0.012   NTclustered gi|2119424383|ref|XM_044700532.1| 5763 g24762 i0 92.105 0.0852017937219731 38 3 9 0 275 312 486 449 Naegleria fowleri uncharacterized protein (FDP41_010254), partial mRNA blastn 38 54.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
14535889 14535889 PRJNA533623_P_NODE_65572_length_234_cov_5.092486_g63791_i0 PRJNA533623 65572 234 5.092486 11.91641724 Naegleria pringsheimi 234921 Heterolobosea other_Eukaryota 315 2.42e-81   NTclustered gi|2515557648|gb|OR045415.1| 234921 g63791 i0 92.07 11.1068376068376 227 13 96 5 1 225 5781 6004 Naegleria pringsheimi strain Singh(s) rDNA-containing extrachromosomal element genomic sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 2599 315 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria pringsheimi
17083898 17083898 PRJNA533623_P_NODE_38814_length_352_cov_2.649485_g37040_i0 PRJNA533623 38814 352 2.649485 9.3261872 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 503 7.64e-138   NTclustered gi|11466174|ref|NC_002573.1| 5762 g37040 i0 96.178 0.892045454545455 314 0 89 2 1 314 28700 28399 Naegleria gruberi mitochondrion, complete genome blastn 314 503 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17695781 17695781 PRJNA533623_P_NODE_33214_length_388_cov_15.039755_g31443_i0 PRJNA533623 33214 388 15.039755 58.3542494 Naegleria 5761 Heterolobosea other_Eukaryota 143 2.14e-29   NTclustered gi|2618963742|gb|OR769034.1| 5762 g31443 i0 87.805 34.8144329896907 123 14 53 1 266 388 5057 5178 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 13508 143 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20244282 20244282 PRJNA533623_P_NODE_29816_length_416_cov_1.588732_g28046_i0 PRJNA533623 29816 416 1.588732 6.60912512 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.7 0.011   NTclustered gi|2031944067|emb|OD958338.1| 5763 g28046 i0 86.792 3.62980769230769 53 2 12 3 369 416 12135 12187 Naegleria fowleri Karachi_NF001 strain blastn 1510 54.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
20909250 20909250 PRJNA533623_P_NODE_74857_length_207_cov_1.356164_g73076_i0 PRJNA533623 74857 207 1.356164 2.80725948 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 383 5.65e-102   NTclustered gi|11466174|ref|NC_002573.1| 5762 g73076 i0 100 8.15942028985507 207 0 100 0 1 207 34067 33861 Naegleria gruberi mitochondrion, complete genome blastn 1689 383 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22184122 22184122 PRJNA533623_P_NODE_79918_length_186_cov_7.304000_g78137_i0 PRJNA533623 79918 186 7.304 13.58544 Neovahlkampfia damariscottae 166956 Heterolobosea other_Eukaryota 54.7 0.004   NTclustered gi|2874368068|gb|PQ819792.1| 166956 g78137 i0 100 0.155913978494624 29 0 16 0 137 165 684 656 Neovahlkampfia damariscottae strain CCAP:1588/7 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 29 54.7 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia damariscottae
23458551 23458551 PRJNA533623_P_NODE_3339_length_1196_cov_8.277533_g2364_i0 PRJNA533623 3339 1196 8.277533 98.99929468 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 2189 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g2364 i0 99.666 6.19147157190635 1198 2 100 1 1 1196 7638 8835 Naegleria gruberi mitochondrion, complete genome blastn 7405 2189 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24731947 24731947 PRJNA533623_P_NODE_19780_length_526_cov_3.139785_g18036_i0 PRJNA533623 19780 526 3.139785 16.5152691 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 924 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g18036 i0 99.801 36.8479087452471 503 1 96 0 24 526 3510 3008 Naegleria gruberi mitochondrion, complete genome blastn 19382 924 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;