RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA533623" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA533623 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4333464 4333464 PRJNA533623_P_NODE_4064_length_1106_cov_13.265072_g2981_i0 PRJNA533623 4064 1106 13.265072 146.71169632 Polychytrium aggregatum 110093 Fungi Fungi 573 1.9399999999999996e-158   NTclustered gi|2432155690|ref|XM_053111537.1| 110093 g2981 i0 81.011 2.70886075949367 732 130 66 8 352 1078 1158 431 Polychytrium aggregatum mitochondrial carrier domain-containing protein (BJ171DRAFT_511047), mRNA blastn 2996 573 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
18969165 18969165 PRJNA533623_P_NODE_11735_length_687_cov_21.477636_g10115_i0 PRJNA533623 11735 687 21.477636 147.55135932 Eukaryota 2759 Fungi Fungi 198 8.319999999999999e-46   NTclustered gi|1026973001|ref|XM_016751749.1| 645134 g10115 i0 80.934 32.4235807860262 257 43 37 5 42 295 804 551 Spizellomyces punctatus DAOM BR117 60S ribosomal protein L8 (SPPG_03486), mRNA blastn 22275 198 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;