RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA533623" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA533623 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9435643 9435643 PRJNA533623_P_NODE_79748_length_188_cov_9.102362_g77967_i0 PRJNA533623 79748 188 9.102362 17.11244056 Candidatus Nitrosotenuis aquarius 1846278 Archaea Archaea 307 3.1100000000000005e-79   NTclustered gi|1279207014|gb|CP024808.1| 1846278 g77967 i0 100 0.882978723404255 166 0 88 0 1 166 1134550 1134385 Candidatus Nitrosotenuis aquarius strain AQ6F chromosome, complete genome blastn 166 307 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis aquarius
14534712 14534712 PRJNA533623_P_NODE_15272_length_603_cov_9.924354_g13567_i0 PRJNA533623 15272 603 9.924354 59.84385462 Pyrobaculum aerophilum 13773 Archaea Archaea 994 0   NTclustered gi|18308975|gb|AE009441.1| 178306 g13567 i0 97.284 0.976782752902156 589 11 97 3 20 603 172624 172036 Pyrobaculum aerophilum str. IM2, complete genome blastn 589 994 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
14535898 14535898 PRJNA533623_P_NODE_65952_length_233_cov_2.261628_g64171_i0 PRJNA533623 65952 233 2.261628 5.26959324 Pyrobaculum aerophilum 13773 Archaea Archaea 322 1.44e-83   NTclustered gi|18308975|gb|AE009441.1| 178306 g64171 i0 96.41 0.836909871244635 195 7 84 0 22 216 230470 230664 Pyrobaculum aerophilum str. IM2, complete genome blastn 195 322 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;