contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA533623" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1782237 | 1782237 | PRJNA533623_P_NODE_57242_length_264_cov_6.615764_g55462_i0 | PRJNA533623 | 57242 | 264 | 6.615764 | 17.46561696 | Fusobacterium nucleatum | 851 | Bacteria | Bacteria | 442 | 1.2199999999999994e-119 | NTclustered | gi|2705020071|gb|CP084132.1| | 851 | g55462 | i0 | 100 | 90.1628787878788 | 239 | 0 | 91 | 0 | 26 | 264 | 2142177 | 2141939 | Fusobacterium nucleatum strain KCOM3713 chromosome, complete genome | blastn | 23803 | 442 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 3058050 | 3058050 | PRJNA533623_P_NODE_69683_length_221_cov_1.625000_g67902_i0 | PRJNA533623 | 69683 | 221 | 1.625 | 3.59125 | Fusobacterium periodonticum | 860 | Bacteria | Bacteria | 361 | 2.8699999999999998e-95 | NTclustered | gi|1370537877|gb|CP028108.1| | 860 | g67902 | i0 | 98.529 | 11.0769230769231 | 204 | 3 | 92 | 0 | 18 | 221 | 717404 | 717607 | Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome | blastn | 2448 | 361 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 8159577 | 8159577 | PRJNA533623_P_NODE_51707_length_286_cov_34.808889_g49928_i0 | PRJNA533623 | 51707 | 286 | 34.808889 | 99.55342254 | Leptotrichia mesophila | 3239303 | Bacteria | Bacteria | 405 | 1.76e-108 | NTclustered | gi|2785242249|gb|CP165646.1| | 3239303 | g49928 | i0 | 95.635 | 18.2797202797203 | 252 | 11 | 88 | 0 | 22 | 273 | 53954 | 53703 | Leptotrichia sp. HSP-342 chromosome, complete genome | blastn | 5228 | 405 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia mesophila | ||
| 10710400 | 10710400 | PRJNA533623_P_NODE_32749_length_392_cov_5.193353_g30978_i0 | PRJNA533623 | 32749 | 392 | 5.193353 | 20.35794376 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 680 | 0 | NTclustered | gi|2921540344|gb|CP159327.1| | 76857 | g30978 | i0 | 100 | 1.87755102040816 | 368 | 0 | 94 | 0 | 25 | 392 | 1042607 | 1042974 | Fusobacterium polymorphum strain CTI-6 chromosome, complete genome | blastn | 736 | 680 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 10711113 | 10711113 | PRJNA533623_P_NODE_65289_length_235_cov_3.350575_g63508_i0 | PRJNA533623 | 65289 | 235 | 3.350575 | 7.87385125 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 368 | 1.84e-97 | NTclustered | gi|1276705688|gb|CP024698.1| | 2663009 | g63508 | i0 | 94.894 | 44.9574468085106 | 235 | 12 | 100 | 0 | 1 | 235 | 442271 | 442037 | Fusobacterium pseudoperiodonticum strain KCOM 1283 chromosome, complete genome | blastn | 10565 | 368 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 14535667 | 14535667 | PRJNA533623_P_NODE_5612_length_966_cov_9.323757_g4345_i0 | PRJNA533623 | 5612 | 966 | 9.323757 | 90.06749262 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 1640 | 0 | NTclustered | gi|1791353085|dbj|AP019829.2| | 157687 | g4345 | i0 | 97.311 | 10.0610766045549 | 967 | 25 | 100 | 1 | 1 | 966 | 1633776 | 1634742 | Leptotrichia wadei JCM16777 DNA, complete genome | blastn | 9719 | 1640 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 15808536 | 15808536 | PRJNA533623_P_NODE_13613_length_639_cov_1.802768_g11939_i0 | PRJNA533623 | 13613 | 639 | 1.802768 | 11.51968752 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 1129 | 0 | NTclustered | gi|1276709865|gb|CP024700.1| | 2663009 | g11939 | i0 | 99.676 | 73.1205007824726 | 617 | 2 | 97 | 0 | 23 | 639 | 130318 | 129702 | Fusobacterium pseudoperiodonticum strain KCOM 1263 chromosome, complete genome | blastn | 46724 | 1129 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 15810020 | 15810020 | PRJNA533623_P_NODE_76753_length_203_cov_1.626761_g74972_i0 | PRJNA533623 | 76753 | 203 | 1.626761 | 3.30232483 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 326 | 9.44e-85 | NTclustered | gi|2705022034|gb|CP084128.1| | 2663009 | g74972 | i0 | 96.02 | 26.679802955665 | 201 | 7 | 99 | 1 | 3 | 203 | 677433 | 677632 | Fusobacterium pseudoperiodonticum strain KCOM1322 chromosome, complete genome | blastn | 5416 | 326 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 15810150 | 15810150 | PRJNA533623_P_NODE_9873_length_746_cov_1.798540_g8319_i0 | PRJNA533623 | 9873 | 746 | 1.79854 | 13.4171084 | Fusobacterium nucleatum | 851 | Bacteria | Bacteria | 1351 | 0 | NTclustered | gi|2704983719|gb|CP077132.1| | 851 | g8319 | i0 | 99.33 | 110.265415549598 | 746 | 5 | 100 | 0 | 1 | 746 | 1570358 | 1571103 | Fusobacterium nucleatum strain KCOM3208 chromosome, complete genome | blastn | 82258 | 1351 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 16420693 | 16420693 | PRJNA533623_P_NODE_39433_length_348_cov_3.087108_g37659_i0 | PRJNA533623 | 39433 | 348 | 3.087108 | 10.74313584 | Bacteria | 2 | Bacteria | Bacteria | 621 | 1.9999999999999997e-173 | NTclustered | gi|2704979632|gb|CP077143.1| | 851 | g37659 | i0 | 98.851 | 5.98275862068965 | 348 | 4 | 100 | 0 | 1 | 348 | 224262 | 223915 | Fusobacterium nucleatum strain KCOM2878 chromosome, complete genome | blastn | 2082 | 621 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 18357764 | 18357764 | PRJNA533623_P_NODE_30995_length_406_cov_7.472464_g29224_i0 | PRJNA533623 | 30995 | 406 | 7.472464 | 30.33820384 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 699 | 0 | NTclustered | gi|2704959642|gb|CP077196.1| | 2663009 | g29224 | i0 | 99.479 | 94.4532019704433 | 384 | 2 | 95 | 0 | 23 | 406 | 1990727 | 1991110 | Fusobacterium pseudoperiodonticum strain SB039 chromosome, complete genome | blastn | 38348 | 699 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 22184051 | 22184051 | PRJNA533623_P_NODE_76198_length_204_cov_1.958042_g74417_i0 | PRJNA533623 | 76198 | 204 | 1.958042 | 3.99440568 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 377 | 2.59e-100 | NTclustered | gi|1276707709|gb|CP024699.1| | 2663009 | g74417 | i0 | 100 | 14.9852941176471 | 204 | 0 | 100 | 0 | 1 | 204 | 2321781 | 2321578 | Fusobacterium pseudoperiodonticum strain KCOM 1261 chromosome, complete genome | blastn | 3057 | 377 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;