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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA533623" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 15 ✖

bioproject 1

  • PRJNA533623 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1118026 1118026 PRJNA533623_P_NODE_67801_length_227_cov_1.566265_g66020_i0 PRJNA533623 67801 227 1.566265 3.55542155 Trebouxiophyceae 75966 Plants Plants 331 2.32e-86   NTclustered gi|535783|dbj|D17810.1|CHLLSURRNA 63676 g66020 i0 92.952 99.273127753304 227 16 100 0 1 227 296 70 Chlorella ellipsoidea gene for large subunit rRNA, with group-I self-splicing intron blastn 22535 331 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium ellipsoideum
4333967 4333967 PRJNA533623_P_NODE_63824_length_240_cov_2.905028_g62043_i0 PRJNA533623 63824 240 2.905028 6.9720672 Chloroidium ellipsoideum 63676 Plants Plants 267 7.08e-67   NTclustered gi|535783|dbj|D17810.1|CHLLSURRNA 63676 g62043 i0 88.636 94.2916666666667 220 23 91 2 1 218 2554 2335 Chlorella ellipsoidea gene for large subunit rRNA, with group-I self-splicing intron blastn 22630 267 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium ellipsoideum
8159400 8159400 PRJNA533623_P_NODE_43947_length_323_cov_10.515267_g42173_i0 PRJNA533623 43947 323 10.515267 33.96431241 Chlamydomonas reinhardtii 3055 Plants Plants 147 1.35e-30   NTclustered gi|2082266873|ref|XM_043070842.1| 3055 g42173 i0 91.509 0.656346749226006 106 9 33 0 8 113 1426 1531 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_16g653300v5), mRNA blastn 212 147 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
10046685 10046685 PRJNA533623_P_NODE_9428_length_762_cov_54.711840_g7897_i0 PRJNA533623 9428 762 54.71184 416.9042208 Coccomyxa 41891 Plants Plants 821 0   NTclustered gi|1360638129|gb|AC277064.1| 574566 g7897 i0 86.957 96.6049868766404 736 88 96 7 30 762 1551 821 Coccomyxa subellipsoidea C-169 clone FAHX137-B20, complete sequence blastn 73613 821 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
11985866 11985866 PRJNA533623_P_NODE_69450_length_221_cov_13.012500_g67669_i0 PRJNA533623 69450 221 13.0125 28.757625 Chlorella variabilis 554065 Plants Plants 87.9 5.37e-13   NTclustered gi|237648547|dbj|AB437257.1| 554065 g67669 i0 87.013 23.1764705882353 77 10 35 0 145 221 3785 3709 Chlorella variabilis gene for 28S ribosomal RNA, partial sequence, strain: OK1-ZK blastn 5122 87.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
11985884 11985884 PRJNA533623_P_NODE_70430_length_218_cov_58.197452_g68649_i0 PRJNA533623 70430 218 58.197452 126.87044536 Cephaleuros sp. BN20 2738536 Plants Plants 102 1.89e-17   NTclustered gi|1844674982|gb|MT508724.1| 2738536 g68649 i0 98.276 30.4311926605505 58 1 27 0 58 115 36 93 Cephaleuros sp. BN20 large subunit ribosomal RNA gene, partial sequence blastn 6634 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Trentepohliales Trentepohliaceae Cephaleuros Cephaleuros sp. BN20
13260193 13260193 PRJNA533623_P_NODE_34951_length_376_cov_3.285714_g33179_i0 PRJNA533623 34951 376 3.285714 12.35428464 Auxenochlorella protothecoides 3075 Plants Plants 141 7.43e-29   NTclustered gi|760448344|ref|XM_011402939.1| 3075 g33179 i0 83.553 13.4228723404255 152 23 40 2 101 251 345 495 Auxenochlorella protothecoides 60S ribosomal protein L15 partial mRNA blastn 5047 141 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
14535532 14535532 PRJNA533623_P_NODE_5052_length_1011_cov_8.704211_g3844_i0 PRJNA533623 5052 1011 8.704211 87.99957321 Chlamydomonas reinhardtii 3055 Plants Plants 56.5 0.008   NTclustered gi|2082260707|ref|XM_043068341.1| 3055 g3844 i0 96.97 0.0326409495548961 33 1 3 0 710 742 1145 1177 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g518107v5), mRNA blastn 33 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17696178 17696178 PRJNA533623_P_NODE_9554_length_758_cov_4.208034_g8021_i0 PRJNA533623 9554 758 4.208034 31.89689772 Trebouxia 13786 Plants Plants 1057 0   NTclustered gi|1273623725|gb|KY033354.1| 285713 g8021 i0 92.154 99.2361477572559 752 53 99 6 1 749 6138 6886 Uncultured Trebouxia photobiont voucher Lendemer 46119 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 75221 1057 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia uncultured Trebouxia photobiont
19632780 19632780 PRJNA533623_P_NODE_48496_length_301_cov_2.566667_g46717_i0 PRJNA533623 48496 301 2.566667 7.72566767 uncultured Trebouxia photobiont 285713 Plants Plants 540 4.899999999999999e-149   NTclustered gi|1273623725|gb|KY033354.1| 285713 g46717 i0 99.003 99.9169435215947 301 3 100 0 1 301 6581 6281 Uncultured Trebouxia photobiont voucher Lendemer 46119 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 30075 540 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia uncultured Trebouxia photobiont
21519794 21519794 PRJNA533623_P_NODE_21137_length_506_cov_13.651685_g19389_i0 PRJNA533623 21137 506 13.651685 69.0775261 Eukaryota 2759 Plants Plants 52.8 0.049   NTclustered gi|363992285|gb|JN543393.1| 63409 g19389 i0 94.286 0.124505928853755 35 1 7 1 101 134 82 116 Ulva linza polyubiquitin (UBQ) mRNA, partial cds blastn 63 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva linza
22184025 22184025 PRJNA533623_P_NODE_74738_length_207_cov_2.746575_g72957_i0 PRJNA533623 74738 207 2.746575 5.68541025 Chlamydomonas reinhardtii 3055 Plants Plants 63.9 8.37e-6   NTclustered gi|9408024|emb|AJ242525.1| 3055 g72957 i0 87.273 0.531400966183575 55 7 27 0 111 165 15734 15788 Chlamydomonas reinhardtii partial dhc10 gene for 1 beta dynein heavy chain, exons 16-53 blastn 110 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
24732433 24732433 PRJNA533623_P_NODE_40860_length_339_cov_109.967626_g39086_i0 PRJNA533623 40860 339 109.967626 372.79025214 Cephaleuros sp. BN20 2738536 Plants Plants 100 1.13e-16   NTclustered gi|1844674982|gb|MT508724.1| 2738536 g39086 i0 96.667 19.2182890855457 60 2 18 0 280 339 92 33 Cephaleuros sp. BN20 large subunit ribosomal RNA gene, partial sequence blastn 6515 100 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Trentepohliales Trentepohliaceae Cephaleuros Cephaleuros sp. BN20
24732610 24732610 PRJNA533623_P_NODE_48480_length_301_cov_3.091667_g46701_i0 PRJNA533623 48480 301 3.091667 9.30591767 Nannochloris normandinae 926285 Plants Plants 529 1.0599999999999996e-145   NTclustered gi|922575245|gb|JQ921007.1| 926285 g46701 i0 99.317 104.744186046512 293 1 97 1 1 292 799 507 Nannochloris normandinae strain SAG 9.82 23S large subunit ribosomal RNA gene, partial sequence; chloroplast blastn 31528 529 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris normandinae
24733168 24733168 PRJNA533623_P_NODE_74340_length_208_cov_1.768707_g72559_i0 PRJNA533623 74340 208 1.768707 3.67891056 Bryopsis hypnoides 222885 Plants Plants 63.9 8.42e-6   NTclustered gi|260780633|ref|NC_013359.1| 222885 g72559 i0 97.368 8.02884615384615 38 0 18 1 14 50 130452 130489 Bryopsis hypnoides chloroplast, complete genome blastn 1670 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis hypnoides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;