RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA533114" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA533114 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15807818 15807818 PRJNA533114_P_NODE_45773_length_346_cov_1.692308_g45521_i0 PRJNA533114 45773 346 1.692308 5.85538568 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 111 5.33e-20   NTclustered gi|294925483|ref|XM_002778887.1| 423536 g45521 i0 83.065 8.13583815028902 124 19 36 2 208 330 444 322 Perkinsus marinus ATCC 50983 ribosomal protein S23, putative, mRNA blastn 2815 111 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
23457754 23457754 PRJNA533114_P_NODE_79199_length_272_cov_2.668342_g78947_i0 PRJNA533114 79199 272 2.668342 7.25789024 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 193 1.41e-44   NTclustered gi|294925483|ref|XM_002778887.1| 423536 g78947 i0 91.034 41.9742647058824 145 9 53 4 1 143 269 127 Perkinsus marinus ATCC 50983 ribosomal protein S23, putative, mRNA blastn 11417 193 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;