RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA533114" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA533114 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1780644 1780644 PRJNA533114_P_NODE_5622_length_928_cov_2.574269_g5447_i0 PRJNA533114 5622 928 2.574269 23.88921632 Ergobibamus cyprinoides 926446 Fornicata other_Eukaryota 608 4.4399999999999977e-169   NTclustered gi|339759377|dbj|AB600301.1| 926446 g5447 i0 81.074 81.0334051724138 782 131 83 14 156 928 1279 506 Ergobibamus cyprinoides gene for beta-tubulin, partial cds, strain: CL blastn 75199 608 1 Eukaryota Metamonada   Fornicata       Ergobibamus Ergobibamus cyprinoides
3055895 3055895 PRJNA533114_P_NODE_30703_length_412_cov_3.176991_g30451_i0 PRJNA533114 30703 412 3.176991 13.08920292 Ergobibamus cyprinoides 926446 Fornicata other_Eukaryota 152 3.7899999999999997e-32   NTclustered gi|339759377|dbj|AB600301.1| 926446 g30451 i0 88.71 25.6359223300971 124 14 30 0 289 412 1 124 Ergobibamus cyprinoides gene for beta-tubulin, partial cds, strain: CL blastn 10562 152 1 Eukaryota Metamonada   Fornicata       Ergobibamus Ergobibamus cyprinoides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;