RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA533114" and tax_phylum = "Bryozoa"

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tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA533114 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6882981 6882981 PRJNA533114_P_NODE_59386_length_309_cov_1.288136_g59134_i0 PRJNA533114 59386 309 1.288136 3.98034024 Watersipora subatra 2589382 Bryozoa other_Eukaryota 73.1 2.21e-8   NTclustered gi|2795672412|ref|XM_068084439.1| 2589382 g59134 i0 92.308 0.168284789644013 52 3 17 1 22 73 1665 1715 PREDICTED: Watersipora subatra protein DD3-3-like (LOC137398329), mRNA blastn 52 73.1 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Watersiporidae Watersipora Watersipora subatra
10708883 10708883 PRJNA533114_P_NODE_24629_length_457_cov_17.611979_g24379_i0 PRJNA533114 24629 457 17.611979 80.48674403 Membranipora membranacea 95170 Bryozoa other_Eukaryota 451 3.74e-122   NTclustered gi|2320635325|gb|ON868447.1| 95170 g24379 i0 84.944 92.4004376367615 445 67 97 0 9 453 19 463 Membranipora membranacea calmodulin-like protein 1 mRNA, complete cds blastn 42227 451 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea
11983695 11983695 PRJNA533114_P_NODE_31790_length_406_cov_1.618619_g31538_i0 PRJNA533114 31790 406 1.618619 6.57159314 Membranipora membranacea 95170 Bryozoa other_Eukaryota 475 1.9499999999999994e-129   NTclustered gi|2320635325|gb|ON868447.1| 95170 g31538 i0 89.211 96.4014778325123 380 41 94 0 19 398 472 93 Membranipora membranacea calmodulin-like protein 1 mRNA, complete cds blastn 39139 475 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea
11984267 11984267 PRJNA533114_P_NODE_73230_length_282_cov_1.105263_g72978_i0 PRJNA533114 73230 282 1.105263 3.11684166 Watersipora subatra 2589382 Bryozoa other_Eukaryota 54.7 0.007   NTclustered gi|2795677902|ref|XM_068096074.1| 2589382 g72978 i0 100 0.308510638297872 29 0 10 0 54 82 765 793 PREDICTED: Watersipora subatra cAMP-dependent protein kinase catalytic subunit 1-like (LOC137410624), transcript variant X4, mRNA blastn 87 54.7 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Watersiporidae Watersipora Watersipora subatra

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;