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contig_metadata

24 rows where analysis = "blastn", bioproject = "PRJNA533114" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 24 ✖

bioproject 1

  • PRJNA533114 · 24 ✖

analysis 1

  • blastn · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
505091 505091 PRJNA533114_P_NODE_38541_length_372_cov_4.799331_g38289_i0 PRJNA533114 38541 372 4.799331 17.85351132 Volvox carteri 3067 Plants Plants 143 2.04e-29   NTclustered gi|302843775|ref|XM_002953383.1| 3068 g38289 i0 84.247 13.6344086021505 146 23 39 0 162 307 65 210 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_105955), partial mRNA blastn 5072 143 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
505367 505367 PRJNA533114_P_NODE_5921_length_906_cov_2.691477_g5744_i0 PRJNA533114 5921 906 2.691477 24.38478162 Tetradesmus obliquus 3088 Plants Plants 427 1.3e-114   NTclustered gi|224593222|gb|FJ715709.1| 3088 g5744 i0 79.154 33.9889624724062 638 117 69 16 219 847 642 12 Scenedesmus obliquus strain 1450 translation elongation factor-like protein mRNA, partial cds blastn 30794 427 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
1779840 1779840 PRJNA533114_P_NODE_116342_length_242_cov_1.798817_g116090_i0 PRJNA533114 116342 242 1.798817 4.35313714 Scherffelia dubia 3190 Plants Plants 71.3 6.02e-8   NTclustered gi|1783497212|ref|NC_045363.1| 3190 g116090 i0 77.692 22.5702479338843 130 20 53 8 118 239 31508 31380 Scherffelia dubia culture SAG:17.86 mitochondrion, complete genome blastn 5462 71.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorodendrophyceae Chlorodendrales Chlorodendraceae Scherffelia Scherffelia dubia
1779880 1779880 PRJNA533114_P_NODE_119942_length_241_cov_0.916667_g119690_i0 PRJNA533114 119942 241 0.916667 2.20916747 Chlorella variabilis 554065 Plants Plants 54.7 0.006   NTclustered gi|552843986|ref|XM_005850919.1| 554065 g119690 i0 100 0.120331950207469 29 0 12 0 2 30 932 904 Chlorella variabilis hypothetical protein (CHLNCDRAFT_140778) mRNA, complete cds blastn 29 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
3056334 3056334 PRJNA533114_P_NODE_64903_length_296_cov_1.426009_g64651_i0 PRJNA533114 64903 296 1.426009 4.22098664 Volvox carteri 3067 Plants Plants 52.8 0.027   NTclustered gi|302840869|ref|XM_002951935.1| 3068 g64651 i0 100 0.0945945945945946 28 0 9 0 121 148 6388 6415 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_92533), partial mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
4332191 4332191 PRJNA533114_P_NODE_52864_length_325_cov_1.305556_g52612_i0 PRJNA533114 52864 325 1.305556 4.243057 Monoraphidium neglectum 145388 Plants Plants 58.4 6.56e-4   NTclustered gi|926781971|ref|XM_014044006.1| 145388 g52612 i0 94.595 0.209230769230769 37 2 11 0 149 185 792 756 Monoraphidium neglectum hypothetical protein mRNA blastn 68 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
7495701 7495701 PRJNA533114_P_NODE_66506_length_293_cov_1.277273_g66254_i0 PRJNA533114 66506 293 1.277273 3.74240989 root 1 Root_unresolved Root_unresolved 58.4 5.84e-4   NTclustered gi|302844354|ref|XM_002953672.1| 3068 g66254 i0 94.595 1.51194539249147 37 2 13 0 150 186 58 22 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_106069), partial mRNA blastn 443 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
8158339 8158339 PRJNA533114_P_NODE_7387_length_819_cov_4.774799_g7189_i0 PRJNA533114 7387 819 4.774799 39.10560381 Chlamydomonas reinhardtii 3055 Plants Plants 409 4.2399999999999995e-109   NTclustered gi|2082235498|ref|XM_001700320.2| 3055 g7189 i0 84.597 52.4041514041514 422 54 51 5 37 457 48 459 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g002300v5), mRNA blastn 42919 409 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
9433613 9433613 PRJNA533114_P_NODE_59368_length_309_cov_1.305085_g59116_i0 PRJNA533114 59368 309 1.305085 4.03271265 Hydrocytium acuminatum 1745963 Plants Plants 56.5 0.002   NTclustered gi|2627911945|ref|NC_084269.1| 1745963 g59116 i0 90.476 0.239482200647249 42 4 14 0 118 159 11313 11354 Hydrocytium acuminatum strain SAG 40.91 chloroplast, complete genome blastn 74 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlorococcaceae Hydrocytium Hydrocytium acuminatum
11983140 11983140 PRJNA533114_P_NODE_103990_length_247_cov_0.885057_g103738_i0 PRJNA533114 103990 247 0.885057 2.18609079 Cephaleuros karstenii 1985640 Plants Plants 54.7 0.006   NTclustered gi|2192923902|ref|NC_060534.1| 1985640 g103738 i0 100 0.117408906882591 29 0 12 0 125 153 280455 280483 Cephaleuros karstenii strain GD1942 chloroplast, complete genome blastn 29 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Trentepohliales Trentepohliaceae Cephaleuros Cephaleuros karstenii
11983197 11983197 PRJNA533114_P_NODE_10950_length_682_cov_2.054187_g10716_i0 PRJNA533114 10950 682 2.054187 14.00955534 Chlamydomonas reinhardtii 3055 Plants Plants 56.5 0.005   NTclustered gi|2082250453|ref|XM_001690409.2| 3055 g10716 i0 100 0.0439882697947214 30 0 4 0 197 226 206 177 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_07g328350v5), mRNA blastn 30 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
11984148 11984148 PRJNA533114_P_NODE_62870_length_301_cov_1.285088_g62618_i0 PRJNA533114 62870 301 1.285088 3.86811488 Monoraphidium neglectum 145388 Plants Plants 183 9.519999999999997e-42   NTclustered gi|926790142|ref|XM_014048091.1| 145388 g62618 i0 78.378 1.14285714285714 296 54 97 8 4 294 151 441 Monoraphidium neglectum small subunit ribosomal protein SAe mRNA blastn 344 183 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
11984254 11984254 PRJNA533114_P_NODE_72110_length_284_cov_0.881517_g71858_i0 PRJNA533114 72110 284 0.881517 2.50350828 Chlamydomonas reinhardtii 3055 Plants Plants 62.1 4.36e-5   NTclustered gi|2082235566|ref|XM_043058140.1| 3055 g71858 i0 100 0.232394366197183 33 0 12 0 200 232 1334 1302 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g003376v5), mRNA blastn 66 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
11984309 11984309 PRJNA533114_P_NODE_77350_length_275_cov_1.564356_g77098_i0 PRJNA533114 77350 275 1.564356 4.301979 Polytomella parva 51329 Plants Plants 202 2.37e-47   NTclustered gi|1861355677|gb|MT377089.1| 51329 g77098 i0 80.669 51.9890909090909 269 45 97 7 9 275 770 507 Polytomella parva clone 0016332693 heat shock protein 70c (HS70) mRNA, partial cds; plastid blastn 14297 202 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella parva
14533432 14533432 PRJNA533114_P_NODE_122972_length_226_cov_2.117647_g122720_i0 PRJNA533114 122972 226 2.117647 4.78588222 Monoraphidium neglectum 145388 Plants Plants 246 8.599999999999998e-61   NTclustered gi|926791444|ref|XM_014048742.1| 145388 g122720 i0 86.726 106.106194690265 226 24 99 3 1 223 2736 2514 Monoraphidium neglectum adenosylhomocysteinase mRNA blastn 23980 246 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
15145691 15145691 PRJNA533114_P_NODE_92032_length_253_cov_1.066667_g91780_i0 PRJNA533114 92032 253 1.066667 2.69866751 Eukaryota 2759 Plants Plants 182 2.81e-41   NTclustered gi|2082269713|ref|XM_001700374.2| 3055 g91780 i0 85.227 28.2845849802372 176 26 70 0 62 237 1047 872 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_17g711650v5), mRNA blastn 7156 183 0.994535519125683 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17695497 17695497 PRJNA533114_P_NODE_32974_length_399_cov_2.288344_g32722_i0 PRJNA533114 32974 399 2.288344 9.13049256 Eukaryota 2759 Plants Plants 473 6.879999999999999e-129   NTclustered gi|969822364|gb|KT950949.1| 3130 g32722 i0 91.329 86.1528822055138 346 30 87 0 1 346 348 3 Bryopsis plumosa actin mRNA, partial cds blastn 34375 473 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis plumosa
18356559 18356559 PRJNA533114_P_NODE_43035_length_355_cov_1.829787_g42783_i0 PRJNA533114 43035 355 1.829787 6.49574385 Chlorella variabilis 554065 Plants Plants 329 1.39e-85   NTclustered gi|552844675|ref|XM_005851082.1| 554065 g42783 i0 85.806 86.2619718309859 310 44 87 0 5 314 395 86 Chlorella variabilis alpha-tubulin (CHLNCDRAFT_33793) mRNA, complete cds blastn 30623 329 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
19631524 19631524 PRJNA533114_P_NODE_73836_length_281_cov_1.144231_g73584_i0 PRJNA533114 73836 281 1.144231 3.21528911 Auxenochlorella protothecoides 3075 Plants Plants 93.5 1.53e-14   NTclustered gi|760436996|ref|XM_011397265.1| 3075 g73584 i0 89.189 3.43772241992883 74 8 26 0 134 207 146 219 Auxenochlorella protothecoides ATP synthase subunit gamma, mitochondrial partial mRNA blastn 966 93.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
22181279 22181279 PRJNA533114_P_NODE_120818_length_241_cov_0.916667_g120566_i0 PRJNA533114 120818 241 0.916667 2.20916747 Chlamydomonas reinhardtii 3055 Plants Plants 106 1.64e-18   NTclustered gi|2082238114|ref|XM_001701583.2| 3055 g120566 i0 82.645 0.838174273858921 121 19 50 2 111 230 621 502 Chlamydomonas reinhardtii ribosomal protein L19 (CHLRE_02g075700v5), mRNA blastn 202 106 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
24731472 24731472 PRJNA533114_P_NODE_76180_length_277_cov_1.490196_g75928_i0 PRJNA533114 76180 277 1.490196 4.12784292 Monoraphidium neglectum 145388 Plants Plants 52.8 0.025   NTclustered gi|926769539|ref|XM_014037790.1| 145388 g75928 i0 100 0.101083032490975 28 0 10 0 149 176 919 892 Monoraphidium neglectum hypothetical protein mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
24731511 24731511 PRJNA533114_P_NODE_80440_length_271_cov_0.873737_g80188_i0 PRJNA533114 80440 271 0.873737 2.36782727 Chlamydomonas reinhardtii 3055 Plants Plants 254 6.35e-63   NTclustered gi|224593220|gb|FJ715708.1| 3055 g80188 i0 85.892 34.280442804428 241 30 88 4 1 239 239 1 Chlamydomonas reinhardtii strain CC1690 translation elongation factor-like protein mRNA, partial cds blastn 9290 254 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
25343948 25343948 PRJNA533114_P_NODE_67600_length_290_cov_2.778802_g67348_i0 PRJNA533114 67600 290 2.778802 8.0585258 Eukaryota 2759 Plants Plants 52.8 0.027   NTclustered gi|2082266802|ref|XM_043070809.1| 3055 g67348 i0 100 0.224137931034483 28 0 10 0 174 201 1023 1050 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_16g651750v5), mRNA blastn 65 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
25343966 25343966 PRJNA533114_P_NODE_84220_length_265_cov_1.046875_g83968_i0 PRJNA533114 84220 265 1.046875 2.77421875 root 1 Root_unresolved Root_unresolved 270 6.14e-68   NTclustered gi|2082254042|ref|XM_001694416.2| 3055 g83968 i0 85.882 99.0867924528302 255 34 96 2 1 254 1568 1821 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g393200v5), mRNA blastn 26258 270 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;