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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA533114" and tax_clade = "Haptista"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 8 ✖

bioproject 1

  • PRJNA533114 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1780251 1780251 PRJNA533114_P_NODE_29402_length_421_cov_1.540230_g29150_i0 PRJNA533114 29402 421 1.54023 6.4843683 Raphidocystis contractilis 2792838 Root_unresolved Root_unresolved 241 8.06e-59   NTclustered gi|259475613|emb|FN392421.1| 2792838 g29150 i0 78.706 5.92636579572447 371 71 87 7 33 399 400 34 Raphidiophrys contractilis partial mRNA for 40S ribosomal protein S18, contig 0726MP2-15 blastn 2495 241 1 Eukaryota Haptista     Centroplasthelida Acanthocystida Raphidocystidae Raphidocystis Raphidocystis contractilis
5609423 5609423 PRJNA533114_P_NODE_89385_length_257_cov_1.255435_g89133_i0 PRJNA533114 89385 257 1.255435 3.22646795 Raphidocystis contractilis 2792838 Root_unresolved Root_unresolved 220 6.06e-53   NTclustered gi|159147872|dbj|AB288080.1| 2792838 g89133 i0 82.239 2.63424124513619 259 42 100 4 1 257 1598 1342 Raphidocystis contractilis EF2 mRNA for elongation factor 2, partial cds blastn 677 220 1 Eukaryota Haptista     Centroplasthelida Acanthocystida Raphidocystidae Raphidocystis Raphidocystis contractilis
9433538 9433538 PRJNA533114_P_NODE_53328_length_324_cov_1.147410_g53076_i0 PRJNA533114 53328 324 1.14741 3.7176084 Chlamydaster sterni 193542 Root_unresolved Root_unresolved 555 1.8999999999999993e-153   NTclustered gi|33089907|gb|AY283744.1| 193542 g53076 i0 97.531 80.6882716049383 324 8 100 0 1 324 684 361 Chlamydaster sterni isolate Chlam30_2 actin mRNA, partial cds blastn 26143 555 1 Eukaryota Haptista     Centroplasthelida Pterocystida Pterocystidae Chlamydaster Chlamydaster sterni
13258222 13258222 PRJNA533114_P_NODE_107211_length_246_cov_0.890173_g106959_i0 PRJNA533114 107211 246 0.890173 2.18982558 Raphidocystis contractilis 2792838 Root_unresolved Root_unresolved 100 7.82e-17   NTclustered gi|259475561|emb|FN392369.1| 2792838 g106959 i0 82.456 0.463414634146341 114 20 46 0 1 114 694 807 Raphidiophrys contractilis partial mRNA for transitional endoplasmic reticulum ATPase, contig 01884 blastn 114 100 1 Eukaryota Haptista     Centroplasthelida Acanthocystida Raphidocystidae Raphidocystis Raphidocystis contractilis
20907196 20907196 PRJNA533114_P_NODE_43217_length_355_cov_0.975177_g42965_i0 PRJNA533114 43217 355 0.975177 3.46187835 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 320 8.34e-83   NTclustered gi|551577960|ref|XM_005774525.1| 280463 g42965 i0 85.531 90.3211267605634 311 40 87 3 1 310 549 243 Emiliania huxleyi CCMP1516 hypothetical protein partial mRNA blastn 32064 320 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
23456765 23456765 PRJNA533114_P_NODE_12879_length_631_cov_1.116487_g12637_i0 PRJNA533114 12879 631 1.116487 7.04503297 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 455 4.09e-123   NTclustered gi|551539306|ref|XM_005758086.1| 280463 g12637 i0 81.282 35.3882725832013 577 94 90 13 7 576 740 171 Emiliania huxleyi CCMP1516 receptor of activated protein kinase C partial mRNA blastn 22330 455 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
24730999 24730999 PRJNA533114_P_NODE_37480_length_377_cov_1.496711_g37228_i0 PRJNA533114 37480 377 1.496711 5.64260047 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 235 3.3199999999999994e-57   NTclustered gi|551548842|ref|XM_005762007.1| 280463 g37228 i0 81.164 37.4668435013263 292 55 77 0 7 298 395 104 Emiliania huxleyi CCMP1516 hypothetical protein mRNA blastn 14125 235 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
24731129 24731129 PRJNA533114_P_NODE_48240_length_338_cov_2.218868_g47988_i0 PRJNA533114 48240 338 2.218868 7.49977384 Raphidocystis contractilis 2792838 Root_unresolved Root_unresolved 228 4.9399999999999985e-55   NTclustered gi|259475521|emb|FN392329.1| 2792838 g47988 i0 81.495 3.83727810650888 281 48 83 4 13 291 338 60 Raphidiophrys contractilis partial mRNA for ADP/ATP translocase 1, contig 0629MP25 blastn 1297 228 1 Eukaryota Haptista     Centroplasthelida Acanthocystida Raphidocystidae Raphidocystis Raphidocystis contractilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;