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contig_metadata

29 rows where analysis = "blastn", bioproject = "PRJNA529924" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 29 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA529924 · 29 ✖

analysis 1

  • blastn · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
503267 503267 PRJNA529924_P_NODE_161_length_1455_cov_4.201262_g126_i0 PRJNA529924 161 1455 4.201262 61.1283621 Philodina roseola 96448 Rotifera other_Eukaryota 1814 0   NTclustered gi|209867641|gb|EU637019.1| 96448 g126 i0 89.54 76.0192439862543 1434 147 98 1 25 1455 27977 26544 Philodina roseola tyramine beta hydroxylase-like protein, metallophosphoesterase domain containing 1-like protein, transmembrane protein 45b-like protein, solute carrier family 7-like protein, G protein-coupled receptor-like protein, serpin 6 precursor, molybdenum cofactor-like protein, hypothetical protein, ankyrin repeat containing protein, neuronal calcium sensor family member 2-like protein, HSP70-like protein, hypothetical protein, Hox-5b, Smc-like protein, and golgi autoantigen golgin subfamily a4-like protein genes, complete cds blastn 110608 1814 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
503293 503293 PRJNA529924_P_NODE_761_length_704_cov_3.223704_g626_i1 PRJNA529924 761 704 3.223704 22.69487616 Philodina roseola 96448 Rotifera other_Eukaryota 643 9.119999999999999e-180   NTclustered gi|183178949|gb|EU432548.1| 96448 g626 i1 94.286 5.34232954545455 420 24 77 0 163 582 34884 34465 Philodina roseola guanylyl cyclase gene, complete sequence; and TAR-protein (TAR_2), U1-like Zn-finger-containing protein (U1Zn_2), unknown (PruORF0001_2), unknown (PrPCG0001_2), methione sulfide reductase B (MSRB_2), Strabismus, serine-threonin kinase copy 2, plasma membrane calcium-dependent ATPase (CAse_2), myosin essential light chain (MELC_2), 82 kDa heat shock protein (hsp82_4), FBox-LRR protein (FBoxLRR_2), TPRA_2 (TPRA_2), phosphoribosylaminoimidazole carboxylase (PAICS_2), and unknown (PruORF0002_2) genes, complete cds blastn 3761 643 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
1778558 1778558 PRJNA529924_P_NODE_422_length_968_cov_8.502662_g316_i1 PRJNA529924 422 968 8.502662 82.30576816 Philodina citrina 468664 Rotifera other_Eukaryota 645 3.529999999999999e-180   NTclustered gi|407227484|emb|FR856884.1| 468664 g316 i1 89.06 23.6828512396694 521 55 54 2 1 520 4861 5380 Philodina citrina complete mitochondrial genome blastn 22925 645 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
1778568 1778568 PRJNA529924_P_NODE_722_length_728_cov_5.786838_g591_i0 PRJNA529924 722 728 5.786838 42.12818064 Philodina citrina 468664 Rotifera other_Eukaryota 664 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g591 i0 82.907 14.4107142857143 743 102 99 10 9 728 3978 4718 Philodina citrina complete mitochondrial genome blastn 10491 664 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
3054240 3054240 PRJNA529924_P_NODE_303_length_1138_cov_10.357078_g234_i0 PRJNA529924 303 1138 10.357078 117.86354764 Brachionus rubens 392764 Rotifera other_Eukaryota 662 0   NTclustered gi|632795126|gb|KJ489417.1| 392764 g234 i0 80.247 25.6142355008787 891 166 78 10 4 889 18 903 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 29149 662 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
3054243 3054243 PRJNA529924_P_NODE_403_length_990_cov_9.034339_g316_i0 PRJNA529924 403 990 9.034339 89.4399561 Philodina citrina 468664 Rotifera other_Eukaryota 1181 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g316 i0 88.194 39.5838383838384 991 115 100 2 1 990 4861 5850 Philodina citrina complete mitochondrial genome blastn 39188 1181 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
3054254 3054254 PRJNA529924_P_NODE_703_length_742_cov_18.692847_g573_i0 PRJNA529924 703 742 18.692847 138.70092474 Philodina citrina 468664 Rotifera other_Eukaryota 861 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g573 i0 87.875 14.199460916442 734 87 99 2 1 733 10401 11133 Philodina citrina complete mitochondrial genome blastn 10536 861 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
4330196 4330196 PRJNA529924_P_NODE_1604_length_427_cov_7.590452_g1430_i0 PRJNA529924 1604 427 7.590452 32.41123004 Philodina citrina 468664 Rotifera other_Eukaryota 479 1.5899999999999996e-130   NTclustered gi|407227484|emb|FR856884.1| 468664 g1430 i0 86.916 2.66978922716628 428 54 100 2 1 427 3247 3673 Philodina citrina complete mitochondrial genome blastn 1140 479 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
4330215 4330215 PRJNA529924_P_NODE_764_length_703_cov_2.643917_g629_i0 PRJNA529924 764 703 2.643917 18.58673651 Philodina sp. NPS-2005 317012 Rotifera other_Eukaryota 784 0   NTclustered gi|62362201|gb|AY942840.1| 317012 g629 i0 91.964 14.8492176386913 560 41 79 4 147 703 576 18 Philodina sp. NPS-2005 fba1-like protein mRNA, partial cds blastn 10439 784 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina sp. NPS-2005
6880901 6880901 PRJNA529924_P_NODE_2666_length_279_cov_3.756000_g2492_i0 PRJNA529924 2666 279 3.756 10.47924 Philodina roseola 96448 Rotifera other_Eukaryota 344 3.79e-90   NTclustered gi|209867641|gb|EU637019.1| 96448 g2492 i0 88.889 95.0179211469534 279 31 100 0 1 279 26451 26729 Philodina roseola tyramine beta hydroxylase-like protein, metallophosphoesterase domain containing 1-like protein, transmembrane protein 45b-like protein, solute carrier family 7-like protein, G protein-coupled receptor-like protein, serpin 6 precursor, molybdenum cofactor-like protein, hypothetical protein, ankyrin repeat containing protein, neuronal calcium sensor family member 2-like protein, HSP70-like protein, hypothetical protein, Hox-5b, Smc-like protein, and golgi autoantigen golgin subfamily a4-like protein genes, complete cds blastn 26510 344 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
6880916 6880916 PRJNA529924_P_NODE_646_length_777_cov_105.978610_g522_i0 PRJNA529924 646 777 105.97861 823.4537997 Philodina citrina 468664 Rotifera other_Eukaryota 1013 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g522 i0 90.719 27.2844272844273 765 63 98 8 5 767 1656 2414 Philodina citrina complete mitochondrial genome blastn 21200 1013 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
8156139 8156139 PRJNA529924_P_NODE_427_length_965_cov_6.654915_g337_i0 PRJNA529924 427 965 6.654915 64.21992975 Adineta vaga 104782 Rotifera other_Eukaryota 665 0   NTclustered gi|187233663|gb|EU643498.1| 104782 g337 i0 85.271 1.21865284974093 645 95 67 0 34 678 1 645 Adineta vaga ribosomal protein S1a mRNA, partial cds blastn 1176 665 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
8156149 8156149 PRJNA529924_P_NODE_907_length_626_cov_9.428811_g760_i0 PRJNA529924 907 626 9.428811 59.02435686 Adineta vaga 104782 Rotifera other_Eukaryota 455 4.05e-123   NTclustered gi|187233665|gb|EU643499.1| 104782 g760 i0 85.202 0.712460063897764 446 63 71 2 29 474 1 443 Adineta vaga ribosomal protein L26 mRNA, partial cds blastn 446 455 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
9431530 9431530 PRJNA529924_P_NODE_1028_length_584_cov_2.459459_g875_i0 PRJNA529924 1028 584 2.459459 14.36324056 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 274 1.1299999999999999e-68   NTclustered gi|1143271490|gb|KX822782.1| 104777 g875 i0 79.897 3.89212328767123 388 67 65 11 102 482 2616 2999 Brachionus calyciflorus chromosome II mitochondrion, complete sequence blastn 2273 274 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
10707221 10707221 PRJNA529924_P_NODE_4569_length_171_cov_2.014085_g4395_i0 PRJNA529924 4569 171 2.014085 3.44408535 Philodina roseola 96448 Rotifera other_Eukaryota 213 6.21e-51   NTclustered gi|209867641|gb|EU637019.1| 96448 g4395 i0 89.759 0.970760233918129 166 17 97 0 4 169 29266 29101 Philodina roseola tyramine beta hydroxylase-like protein, metallophosphoesterase domain containing 1-like protein, transmembrane protein 45b-like protein, solute carrier family 7-like protein, G protein-coupled receptor-like protein, serpin 6 precursor, molybdenum cofactor-like protein, hypothetical protein, ankyrin repeat containing protein, neuronal calcium sensor family member 2-like protein, HSP70-like protein, hypothetical protein, Hox-5b, Smc-like protein, and golgi autoantigen golgin subfamily a4-like protein genes, complete cds blastn 166 213 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
10707223 10707223 PRJNA529924_P_NODE_4729_length_163_cov_2.059701_g4555_i0 PRJNA529924 4729 163 2.059701 3.35731263 Brachionus plicatilis 10195 Rotifera other_Eukaryota 176 7.73e-40   NTclustered gi|567315825|dbj|AB775785.1| 10195 g4555 i0 87.097 48.3680981595092 155 20 95 0 1 155 158 312 Brachionus plicatilis hsp70-2 mRNA for heat shock 70 kDa protein 2, complete cds blastn 7884 176 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
11981960 11981960 PRJNA529924_P_NODE_1030_length_583_cov_17.321300_g877_i0 PRJNA529924 1030 583 17.3213 100.983179 Philodina citrina 468664 Rotifera other_Eukaryota 713 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g877 i0 88.966 34.8216123499142 580 60 99 4 2 579 9712 10289 Philodina citrina complete mitochondrial genome blastn 20301 713 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
14532111 14532111 PRJNA529924_P_NODE_1112_length_552_cov_16.126195_g954_i0 PRJNA529924 1112 552 16.126195 89.0165964 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 215 6.55e-51   NTclustered gi|1800329609|gb|MN417951.1| 104777 g954 i0 77.285 5.41485507246377 383 75 68 11 1 377 10211 9835 Brachionus calyciflorus chromosome I mitochondrion, complete sequence blastn 2989 215 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
17080554 17080554 PRJNA529924_P_NODE_134_length_1552_cov_17.659882_g105_i0 PRJNA529924 134 1552 17.659882 274.08136864 Brachionus rubens 392764 Rotifera other_Eukaryota 1371 0   NTclustered gi|632795131|gb|KJ489418.1| 392764 g105 i0 82.687 51.3769329896907 1548 264 99 4 7 1552 1561 16 Brachionus rubens chromosome II mitochondrion, complete sequence blastn 79737 1371 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
17080565 17080565 PRJNA529924_P_NODE_2474_length_297_cov_34.138060_g2300_i0 PRJNA529924 2474 297 34.13806 101.3900382 Philodina citrina 468664 Rotifera other_Eukaryota 368 2.41e-97   NTclustered gi|407227484|emb|FR856884.1| 468664 g2300 i0 90.21 10.8013468013468 286 23 96 5 11 295 2414 2133 Philodina citrina complete mitochondrial genome blastn 3208 368 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
19629237 19629237 PRJNA529924_P_NODE_136_length_1535_cov_38.964143_g106_i0 PRJNA529924 136 1535 38.964143 598.09959505 Philodina citrina 468664 Rotifera other_Eukaryota 1888 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g106 i0 88.947 47.0241042345277 1529 169 99 0 1 1529 13 1541 Philodina citrina complete mitochondrial genome blastn 72182 1888 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
19629261 19629261 PRJNA529924_P_NODE_736_length_718_cov_10.236575_g603_i0 PRJNA529924 736 718 10.236575 73.4986085 Brachionus urceolaris 204736 Rotifera other_Eukaryota 736 0   NTclustered gi|403492655|gb|JX193066.1| 204736 g603 i0 84.68 98.8857938718663 718 110 100 0 1 718 809 92 Brachionus urceolaris isolate A458b alpha tubulin gene, partial cds blastn 71000 736 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus urceolaris
22179911 22179911 PRJNA529924_P_NODE_1318_length_492_cov_5.507559_g1149_i0 PRJNA529924 1318 492 5.507559 27.09719028 Philodina sp. NPS-2005 317012 Rotifera other_Eukaryota 628 1.7399999999999995e-175   NTclustered gi|62362199|gb|AY942839.1| 317012 g1149 i0 91.741 5.45325203252033 448 37 91 0 1 448 501 54 Philodina sp. NPS-2005 S14e ribosomal protein-like protein mRNA, complete cds blastn 2683 628 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina sp. NPS-2005
22179931 22179931 PRJNA529924_P_NODE_338_length_1090_cov_7.233742_g261_i0 PRJNA529924 338 1090 7.233742 78.8477878 Philodina sp. NPS-2005 317012 Rotifera other_Eukaryota 979 0   NTclustered gi|62362203|gb|AY942841.1| 317012 g261 i0 94.896 1.17798165137615 627 31 57 1 1 626 13 639 Philodina sp. NPS-2005 guanine nucleotide binding protein beta polypeptide 2-like 1 mRNA, partial cds blastn 1284 979 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina sp. NPS-2005
22794438 22794438 PRJNA529924_P_NODE_2678_length_278_cov_1.506024_g2504_i0 PRJNA529924 2678 278 1.506024 4.18674672 Metazoa 33208 Rotifera other_Eukaryota 514 2.7199999999999996e-141   NTclustered gi|37785582|gb|AY210469.1| 96448 g2504 i0 100 56.3741007194245 278 0 100 0 1 278 2226 1949 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 15672 514 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
22794441 22794441 PRJNA529924_P_NODE_3838_length_200_cov_3.467836_g3664_i0 PRJNA529924 3838 200 3.467836 6.935672 Eurotatoria 2816136 Rotifera other_Eukaryota 370 4.22e-98   NTclustered gi|146157270|gb|EF485012.1| 96448 g3664 i0 100 99.99 200 0 100 0 1 200 300 499 Philodina roseola clone Pr_TEL_M telomeric repeat and subterminal DNA junction blastn 19998 370 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
23455418 23455418 PRJNA529924_P_NODE_3319_length_227_cov_2.323232_g3145_i0 PRJNA529924 3319 227 2.323232 5.27373664 Philodina citrina 468664 Rotifera other_Eukaryota 124 4.22e-24   NTclustered gi|407227484|emb|FR856884.1| 468664 g3145 i0 77.253 1.02643171806167 233 39 99 11 3 227 11395 11621 Philodina citrina complete mitochondrial genome blastn 233 124 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
24729215 24729215 PRJNA529924_P_NODE_220_length_1296_cov_3.900552_g126_i1 PRJNA529924 220 1296 3.900552 50.55115392 Philodina roseola 96448 Rotifera other_Eukaryota 1653 0   NTclustered gi|209867641|gb|EU637019.1| 96448 g126 i1 90.118 69.3850308641975 1275 123 98 1 25 1296 27977 26703 Philodina roseola tyramine beta hydroxylase-like protein, metallophosphoesterase domain containing 1-like protein, transmembrane protein 45b-like protein, solute carrier family 7-like protein, G protein-coupled receptor-like protein, serpin 6 precursor, molybdenum cofactor-like protein, hypothetical protein, ankyrin repeat containing protein, neuronal calcium sensor family member 2-like protein, HSP70-like protein, hypothetical protein, Hox-5b, Smc-like protein, and golgi autoantigen golgin subfamily a4-like protein genes, complete cds blastn 89923 1653 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
24729238 24729238 PRJNA529924_P_NODE_760_length_704_cov_4.165926_g626_i0 PRJNA529924 760 704 4.165926 29.32811904 Philodina roseola 96448 Rotifera other_Eukaryota 599 1.9999999999999995e-166   NTclustered gi|183178949|gb|EU432548.1| 96448 g626 i0 92.381 5.53409090909091 420 32 60 0 163 582 34884 34465 Philodina roseola guanylyl cyclase gene, complete sequence; and TAR-protein (TAR_2), U1-like Zn-finger-containing protein (U1Zn_2), unknown (PruORF0001_2), unknown (PrPCG0001_2), methione sulfide reductase B (MSRB_2), Strabismus, serine-threonin kinase copy 2, plasma membrane calcium-dependent ATPase (CAse_2), myosin essential light chain (MELC_2), 82 kDa heat shock protein (hsp82_4), FBox-LRR protein (FBoxLRR_2), TPRA_2 (TPRA_2), phosphoribosylaminoimidazole carboxylase (PAICS_2), and unknown (PruORF0002_2) genes, complete cds blastn 3896 599 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;