contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA529924" and tax_phylum = "Chordata"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2392725 | 2392725 | PRJNA529924_P_NODE_3802_length_202_cov_2.184971_g3628_i0 | PRJNA529924 | 3802 | 202 | 2.184971 | 4.41364142 | Opisthokonta | 33154 | Chordata | Chordata | 58.4 | 3.78e-4 | NTclustered | gi|1679814366|ref|XM_029483858.1| | 10089 | g3628 | i0 | 89.13 | 9.51485148514852 | 46 | 5 | 23 | 0 | 153 | 198 | 2438 | 2483 | PREDICTED: Mus caroli upstream binding transcription factor (Ubtf), mRNA | blastn | 1922 | 58.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus caroli | |
| 3054242 | 3054242 | PRJNA529924_P_NODE_3163_length_239_cov_1.885714_g2989_i0 | PRJNA529924 | 3163 | 239 | 1.885714 | 4.50685646 | Mus musculus | 10090 | Chordata | Chordata | 54.7 | 0.006 | NTclustered | gi|354797950|gb|JN962451.1| | 10090 | g2989 | i0 | 100 | 0.242677824267782 | 29 | 0 | 12 | 0 | 15 | 43 | 30972 | 31000 | Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Vps37d:tm2a(EUCOMM)Wtsi; transgenic | blastn | 58 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5607003 | 5607003 | PRJNA529924_P_NODE_1025_length_584_cov_32.016216_g872_i0 | PRJNA529924 | 1025 | 584 | 32.016216 | 186.97470144 | Lampetra planeri | 7750 | Chordata | Chordata | 63.9 | 2.67e-5 | NTclustered | gi|2805745495|emb|OZ078522.1| | 7750 | g872 | i0 | 93.023 | 0.563356164383562 | 43 | 3 | 7 | 0 | 254 | 296 | 3272563 | 3272521 | Lampetra planeri genome assembly, chromosome: 37 | blastn | 329 | 63.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Hyperoartia | Petromyzontiformes | Petromyzontidae | Lampetra | Lampetra planeri | |
| 5607026 | 5607026 | PRJNA529924_P_NODE_3625_length_210_cov_1.701657_g3451_i0 | PRJNA529924 | 3625 | 210 | 1.701657 | 3.5734797 | Phyllostomus discolor | 89673 | Chordata | Chordata | 137 | 4.95e-28 | NTclustered | gi|1899635224|ref|XM_028530061.2| | 89673 | g3451 | i0 | 81.988 | 34.847619047619 | 161 | 29 | 77 | 0 | 49 | 209 | 124 | 284 | PREDICTED: Phyllostomus discolor small nuclear ribonucleoprotein D2 polypeptide (SNRPD2), mRNA | blastn | 7318 | 137 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Chiroptera | Phyllostomidae | Phyllostomus | Phyllostomus discolor | |
| 6880907 | 6880907 | PRJNA529924_P_NODE_3366_length_224_cov_1.866667_g3192_i0 | PRJNA529924 | 3366 | 224 | 1.866667 | 4.18133408 | Cynocephalus volans | 110931 | Chordata | Chordata | 58.4 | 4.28e-4 | NTclustered | gi|2676494438|ref|XM_063081739.1| | 110931 | g3192 | i0 | 97.059 | 0.303571428571429 | 34 | 1 | 15 | 0 | 140 | 173 | 947 | 980 | PREDICTED: Cynocephalus volans ral guanine nucleotide dissociation stimulator (RALGDS), transcript variant X2, mRNA | blastn | 68 | 58.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Dermoptera | Cynocephalidae | Cynocephalus | Cynocephalus volans | |
| 10045757 | 10045757 | PRJNA529924_P_NODE_2488_length_297_cov_1.559701_g2314_i0 | PRJNA529924 | 2488 | 297 | 1.559701 | 4.63231197 | Artiodactyla | 91561 | Chordata | Chordata | 52.8 | 0.028 | NTclustered | gi|1741490040|ref|XM_022554496.2| | 9749 | g2314 | i0 | 94.118 | 2.4983164983165 | 34 | 2 | 11 | 0 | 82 | 115 | 795 | 762 | PREDICTED: Delphinapterus leucas chromosome unknown C15orf40 homolog (CUNH15orf40), mRNA | blastn | 742 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Monodontidae | Delphinapterus | Delphinapterus leucas | |
| 11320323 | 11320323 | PRJNA529924_P_NODE_1009_length_589_cov_2.542857_g857_i0 | PRJNA529924 | 1009 | 589 | 2.542857 | 14.97742773 | Mus | 10088 | Chordata | Chordata | 1088 | 0 | NTclustered | gi|846387786|dbj|LC061991.1| | 10090 | g857 | i0 | 100 | 100 | 589 | 0 | 100 | 0 | 1 | 589 | 1269 | 681 | Mus musculus mitochondrion DNA, including ATP6, COX3, tRNA-Gly, ND3, tRNA-Arg, ND4L, ND4 genes, complete sequence, sequence_id: (8070..10988)_18 | blastn | 58900 | 1088 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 14532123 | 14532123 | PRJNA529924_P_NODE_3272_length_231_cov_1.846535_g3098_i0 | PRJNA529924 | 3272 | 231 | 1.846535 | 4.26549585 | Phalacrocorax carbo | 9209 | Chordata | Chordata | 174 | 4.22e-39 | NTclustered | gi|2716895773|ref|XM_064453768.1| | 9209 | g3098 | i0 | 84.571 | 43.8398268398268 | 175 | 27 | 76 | 0 | 1 | 175 | 1246 | 1420 | PREDICTED: Phalacrocorax carbo SEC61 translocon subunit alpha 1 (SEC61A1), mRNA | blastn | 10127 | 174 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Suliformes | Phalacrocoracidae | Phalacrocorax | Phalacrocorax carbo | |
| 15805880 | 15805880 | PRJNA529924_P_NODE_4033_length_192_cov_2.595092_g3859_i0 | PRJNA529924 | 4033 | 192 | 2.595092 | 4.98257664 | Pristiophorus japonicus | 55135 | Chordata | Chordata | 54.7 | 0.005 | NTclustered | gi|2891066811|ref|XM_070885675.1| | 55135 | g3859 | i0 | 94.286 | 0.729166666666667 | 35 | 2 | 18 | 0 | 44 | 78 | 3822 | 3856 | PREDICTED: Pristiophorus japonicus adenylate kinase 9 (ak9), transcript variant X4, mRNA | blastn | 140 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Chondrichthyes | Pristiophoridae | Pristiophorus | Pristiophorus japonicus | ||
| 17695206 | 17695206 | PRJNA529924_P_NODE_334_length_1092_cov_3.711195_g257_i0 | PRJNA529924 | 334 | 1092 | 3.711195 | 40.5262494 | Metazoa | 33208 | Chordata | Chordata | 54.7 | 0.031 | NTclustered | gi|2805739099|emb|OZ078460.1| | 7748 | g257 | i0 | 87.755 | 0.142857142857143 | 49 | 2 | 4 | 2 | 294 | 340 | 3096829 | 3096783 | Lampetra fluviatilis genome assembly, chromosome: 57 | blastn | 156 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Hyperoartia | Petromyzontiformes | Petromyzontidae | Lampetra | Lampetra fluviatilis | |
| 19629254 | 19629254 | PRJNA529924_P_NODE_4796_length_160_cov_1.877863_g4622_i0 | PRJNA529924 | 4796 | 160 | 1.877863 | 3.0045808 | Gekko japonicus | 146911 | Chordata | Chordata | 121 | 3.59e-23 | NTclustered | gi|975123481|ref|XM_015421900.1| | 146911 | g4622 | i0 | 81.507 | 2.05 | 146 | 27 | 91 | 0 | 3 | 148 | 183 | 328 | PREDICTED: Gekko japonicus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon (YWHAE), transcript variant X2, mRNA | blastn | 328 | 121 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Lepidosauria | Squamata | Gekkonidae | Gekko | Gekko japonicus | |
| 20905340 | 20905340 | PRJNA529924_P_NODE_2117_length_340_cov_1.758842_g1943_i0 | PRJNA529924 | 2117 | 340 | 1.758842 | 5.9800628 | Branchiostoma lanceolatum | 7740 | Chordata | Chordata | 237 | 8.26e-58 | NTclustered | gi|2770724951|ref|XM_066443415.1| | 7740 | g1943 | i0 | 78.886 | 33.1058823529412 | 341 | 64 | 100 | 4 | 1 | 340 | 719 | 1052 | PREDICTED: Branchiostoma lanceolatum transitional endoplasmic reticulum ATPase (LOC136445413), transcript variant X3, mRNA | blastn | 11256 | 237 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Leptocardii | Amphioxiformes | Branchiostomatidae | Branchiostoma | Branchiostoma lanceolatum | |
| 20905342 | 20905342 | PRJNA529924_P_NODE_2697_length_276_cov_2.846154_g2523_i0 | PRJNA529924 | 2697 | 276 | 2.846154 | 7.85538504 | Mus musculus | 10090 | Chordata | Chordata | 54.7 | 0.007 | NTclustered | gi|2553880601|ref|NG_222840.1| | 10090 | g2523 | i0 | 100 | 0.311594202898551 | 29 | 0 | 11 | 0 | 107 | 135 | 520 | 548 | Mus musculus STARR-seq mESC enhancer starr_37565 (LOC131386949) on chromosome 14 | blastn | 86 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 20905348 | 20905348 | PRJNA529924_P_NODE_4497_length_174_cov_2.420690_g4323_i0 | PRJNA529924 | 4497 | 174 | 2.42069 | 4.2120006 | Lethenteron reissneri | 7753 | Chordata | Chordata | 171 | 3.87e-38 | NTclustered | gi|2635878808|ref|XM_061564990.1| | 7753 | g4323 | i0 | 89.051 | 9.33333333333333 | 137 | 15 | 79 | 0 | 9 | 145 | 2040 | 1904 | PREDICTED: Lethenteron reissneri transitional endoplasmic reticulum ATPase (LOC133350548), mRNA | blastn | 1624 | 171 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Hyperoartia | Petromyzontiformes | Petromyzontidae | Lethenteron | Lethenteron reissneri | |
| 22179937 | 22179937 | PRJNA529924_P_NODE_4378_length_179_cov_2.113333_g4204_i0 | PRJNA529924 | 4378 | 179 | 2.113333 | 3.78286607 | Pristiophorus japonicus | 55135 | Chordata | Chordata | 132 | 1.89e-26 | NTclustered | gi|2891055656|ref|XM_070879849.1| | 55135 | g4204 | i0 | 80.791 | 5.72067039106145 | 177 | 26 | 98 | 2 | 1 | 176 | 406 | 575 | PREDICTED: Pristiophorus japonicus proteasome subunit alpha type-2 (LOC139263794), mRNA | blastn | 1024 | 132 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Chondrichthyes | Pristiophoridae | Pristiophorus | Pristiophorus japonicus | ||
| 24069165 | 24069165 | PRJNA529924_P_NODE_3379_length_223_cov_1.896907_g3205_i0 | PRJNA529924 | 3379 | 223 | 1.896907 | 4.23010261 | Passeriformes | 9126 | Chordata | Chordata | 54.7 | 0.006 | NTclustered | gi|2312819819|ref|XM_050983998.1| | 9135 | g3205 | i0 | 96.875 | 4.42152466367713 | 32 | 1 | 14 | 0 | 192 | 223 | 549 | 518 | PREDICTED: Serinus canaria keratin, type II cytoskeletal 1-like (LOC103823901), transcript variant X4, mRNA | blastn | 986 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Fringillidae | Serinus | Serinus canaria |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;