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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA529924" and tax_kingdom = "Fungi"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Fungi · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA529924 · 21 ✖

analysis 1

  • blastn · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
503274 503274 PRJNA529924_P_NODE_2541_length_292_cov_2.250951_g2367_i0 PRJNA529924 2541 292 2.250951 6.57277692 uncultured fungus 175245 Fungi Fungi 86.1 2.67e-12   NTclustered gi|570963359|gb|KF617961.1| 175245 g2367 i0 80.702 0.636986301369863 114 18 38 4 28 139 186 297 Uncultured fungus clone 3182H8 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 186 86.1 1 Eukaryota Opisthokonta Fungi           uncultured fungus
1778561 1778561 PRJNA529924_P_NODE_4482_length_175_cov_1.568493_g4308_i0 PRJNA529924 4482 175 1.568493 2.74486275 Scedosporium apiospermum 563466 Fungi Fungi 56.5 0.001   NTclustered gi|1027064027|ref|XM_016786915.1| 563466 g4308 i0 100 0.17142857142857101 30 0 17 0 5 34 984 955 Scedosporium apiospermum uncharacterized protein (SAPIO_CDS4341), partial mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Microascales Microascaceae Scedosporium Scedosporium apiospermum
3668534 3668534 PRJNA529924_P_NODE_4783_length_160_cov_5.206107_g4609_i0 PRJNA529924 4783 160 5.206107 8.3297712 Lipomycetaceae 29827 Fungi Fungi 228 2.0499999999999995e-55   NTclustered gi|1209454371|ref|NG_055353.1| 45792 g4609 i0 92.5 100.25 160 10 100 2 1 160 3611 3454 Lipomyces oligophaga CBS 7107 28S rRNA, partial sequence; from TYPE material blastn 16040 230 0.991304347826087 Eukaryota Opisthokonta Fungi Ascomycota Lipomycetes Lipomycetales Lipomycetaceae Lipomyces Lipomyces oligophaga
5607023 5607023 PRJNA529924_P_NODE_3345_length_225_cov_3.913265_g3171_i0 PRJNA529924 3345 225 3.913265 8.80484625 uncultured fungus 175245 Fungi Fungi 274 3.92e-69   NTclustered gi|1824098596|gb|MT236743.1| 175245 g3171 i0 99.338 68.4533333333333 151 1 67 0 1 151 217 367 Uncultured fungus clone 4248_738 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15402 274 1 Eukaryota Opisthokonta Fungi           uncultured fungus
7495362 7495362 PRJNA529924_P_NODE_4966_length_153_cov_1.403226_g4792_i0 PRJNA529924 4966 153 1.403226 2.14693578 Sordariomycetes 147550 Fungi Fungi 283 4.0799999999999995e-72   NTclustered gi|1253666396|gb|KU710348.2| 5113 g4792 i0 100 100 153 0 100 0 1 153 200 48 Epichloe typhina strain E8 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 15300 283 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Clavicipitaceae Epichloe Epichloe typhina
11320326 11320326 PRJNA529924_P_NODE_1749_length_400_cov_9.148248_g1575_i0 PRJNA529924 1749 400 9.148248 36.592992 Ascomycota 4890 Fungi Fungi 678 0   NTclustered gi|1720278315|gb|MN268784.1| 36015 g1575 i0 97.25 102.0025 400 11 100 0 1 400 507 906 Pichia kluyveri strain SM12UFAM small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 40801 678 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Pichia Pichia kluyveri
11981984 11981984 PRJNA529924_P_NODE_3990_length_194_cov_2.260606_g3816_i0 PRJNA529924 3990 194 2.260606 4.38557564 Meira miltonrushii 1280837 Fungi Fungi 145 2.69e-30   NTclustered gi|1418864217|ref|XM_025498415.1| 1280837 g3816 i0 84.459 16.6237113402062 148 21 76 2 21 167 1107 1253 Meira miltonrushii isocitrate dehydrogenase NADP-dependent (FA14DRAFT_159847), mRNA blastn 3225 145 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Exobasidiales Brachybasidiaceae Meira Meira miltonrushii
11981985 11981985 PRJNA529924_P_NODE_4450_length_176_cov_2.176871_g4276_i0 PRJNA529924 4450 176 2.176871 3.83129296 Boeremia exigua 749465 Fungi Fungi 180 6.53e-41   NTclustered gi|2185325667|ref|XM_046146400.1| 749465 g4276 i0 86.31 2.85795454545455 168 19 94 4 8 173 1395 1230 Boeremia exigua P-loop containing nucleoside triphosphate hydrolase protein (C7974DRAFT_468526), mRNA blastn 503 180 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Boeremia Boeremia exigua
12596230 12596230 PRJNA529924_P_NODE_3510_length_216_cov_1.834225_g3336_i0 PRJNA529924 3510 216 1.834225 3.961926 Fungi 4751 Fungi Fungi 52.8 0.019   NTclustered gi|998526734|ref|XM_015613428.1| 58627 g3336 i0 96.774 0.273148148148148 31 1 14 0 7 37 778 748 Debaryomyces fabryi uncharacterized protein (AC631_04599), partial mRNA blastn 59 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Debaryomyces Debaryomyces fabryi
13257002 13257002 PRJNA529924_P_NODE_1271_length_503_cov_5.310127_g1104_i0 PRJNA529924 1271 503 5.310127 26.70993881 Arthroderma uncinatum 74035 Fungi Fungi 73.1 3.77e-8   NTclustered gi|1833505273|ref|XM_033553871.1| 74035 g1104 i0 97.619 7.43339960238569 42 1 8 0 377 418 1559 1600 Arthroderma uncinatum signal recognition particle protein SRP54 (GIQ15_06454), partial mRNA blastn 3739 73.1 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Onygenales Arthrodermataceae Arthroderma Arthroderma uncinatum
13257021 13257021 PRJNA529924_P_NODE_4471_length_175_cov_2.623288_g4297_i0 PRJNA529924 4471 175 2.623288 4.590754 Laccaria bicolor 29883 Fungi Fungi 87.9 4.04e-13   NTclustered gi|170087135|ref|XM_001874756.1| 486041 g4297 i0 86.25 2.10857142857143 80 11 46 0 13 92 172 93 Laccaria bicolor S238N-H82 uncharacterized protein (LACBIDRAFT_188038), mRNA blastn 369 87.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Hydnangiaceae Laccaria Laccaria bicolor
18968791 18968791 PRJNA529924_P_NODE_3015_length_250_cov_2.190045_g2841_i0 PRJNA529924 3015 250 2.190045 5.4751125 Eukaryota 2759 Fungi Fungi 385 1.97e-102   NTclustered gi|395133847|gb|JQ951587.1| 175243 g2841 i0 92.126 101.6 254 16 100 1 1 250 77 330 Uncultured Ascomycota clone PK3_2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 25400 385 1 Eukaryota Opisthokonta Fungi Ascomycota         uncultured Ascomycota
19629245 19629245 PRJNA529924_P_NODE_2896_length_259_cov_4.047826_g2722_i0 PRJNA529924 2896 259 4.047826 10.48386934 Kondoa malvinella 36055 Fungi Fungi 416 7.259999999999999e-112   NTclustered gi|6273180|gb|AF189903.1| 36055 g2722 i0 96.109 98.3281853281853 257 2 99 1 3 259 566 318 Kondoa malvinella culture CBS:6082 26S ribosomal RNA gene, partial sequence blastn 25467 416 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricostilbomycetes Agaricostilbales Kondoaceae Kondoa Kondoa malvinella
19629247 19629247 PRJNA529924_P_NODE_3476_length_218_cov_1.820106_g3302_i0 PRJNA529924 3476 218 1.820106 3.96783108 Coniosporium apollinis 61459 Fungi Fungi 119 1.87e-22   NTclustered gi|667839604|ref|XM_007785780.1| 1168221 g3302 i0 80 2.87155963302752 160 32 73 0 59 218 1271 1112 Coniosporium apollinis CBS 100218 T-complex protein 1 subunit epsilon (W97_07911), partial mRNA blastn 626 119 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes     Coniosporium Coniosporium apollinis
21519275 21519275 PRJNA529924_P_NODE_2097_length_343_cov_5.671975_g1923_i0 PRJNA529924 2097 343 5.671975 19.45487425 Basidiomycota 5204 Fungi Fungi 294 4.88e-75   NTclustered gi|1393510851|ref|NG_057733.1| 36055 g1923 i0 97.126 97.0699708454811 174 5 97 0 1 174 953 1126 Kondoa malvinella CBS 6082 28S rRNA gene, partial sequence; from TYPE material blastn 33295 294 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricostilbomycetes Agaricostilbales Kondoaceae Kondoa Kondoa malvinella
22179928 22179928 PRJNA529924_P_NODE_3118_length_241_cov_6.886792_g2944_i0 PRJNA529924 3118 241 6.886792 16.59716872 Malassezia restricta 76775 Fungi Fungi 412 8.64e-111   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g2944 i0 97.51 77.7136929460581 241 6 100 0 1 241 3058 3298 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 18729 412 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
22794435 22794435 PRJNA529924_P_NODE_1898_length_374_cov_5.510145_g1724_i0 PRJNA529924 1898 374 5.510145 20.6079423 Pichia 4919 Fungi Fungi 671 0   NTclustered gi|1208297571|ref|NG_055122.1| 36015 g1724 i0 100 115.606951871658 363 0 97 0 1 363 2856 3218 Pichia kluyveri NRRL Y-11519 28S rRNA, partial sequence; from TYPE material blastn 43237 671 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Pichia Pichia kluyveri
24729218 24729218 PRJNA529924_P_NODE_2800_length_266_cov_5.029536_g2626_i0 PRJNA529924 2800 266 5.029536 13.37856576 Phlebiopsis crassa 1647769 Fungi Fungi 241 4.840000000000001e-59   NTclustered gi|528533069|dbj|AB809163.1| 1647769 g2626 i0 83.577 96.7744360902256 274 27 100 14 1 266 6265 6528 Porostereum crassum genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, IGS1, 5S rRNA, partial and complete sequence, strain: MAFF 420737 blastn 25742 241 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Phanerochaetaceae Phlebiopsis Phlebiopsis crassa
24729230 24729230 PRJNA529924_P_NODE_5000_length_151_cov_2.237705_g4826_i0 PRJNA529924 5000 151 2.237705 3.37893455 Scheffersomyces amazonensis 1078765 Fungi Fungi 130 5.53e-26   NTclustered gi|2725019975|ref|XM_064880483.1| 1078765 g4826 i0 84.211 36.4966887417219 133 21 88 0 11 143 824 956 Scheffersomyces amazonensis transcriptional release factor (RJT21DRAFT_116791), mRNA blastn 5511 130 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Scheffersomyces Scheffersomyces amazonensis
25343612 25343612 PRJNA529924_P_NODE_4860_length_157_cov_2.500000_g4686_i0 PRJNA529924 4860 157 2.5 3.925 Fusarium 5506 Fungi Fungi 285 1.17e-72   NTclustered gi|572169976|gb|KF061173.1| 62683 g4686 i0 99.363 99.7898089171974 157 1 100 0 1 157 2 158 Fusarium oxysporum f. sp. ciceris isolate Foc161 28S ribosomal RNA gene and 28S-18S ribosomal RNA intergenic spacer, partial sequence blastn 15667 285 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium oxysporum
25343613 25343613 PRJNA529924_P_NODE_900_length_629_cov_5.276667_g754_i0 PRJNA529924 900 629 5.276667 33.19023543 Kondoa 36054 Fungi Fungi 741 0   NTclustered gi|1503120253|ref|NG_062142.1| 4992 g754 i0 99.752 92.3418124006359 404 1 95 0 2 405 1133 730 Kondoa miscanthi JCM 5733 18S rRNA gene, partial sequence; from TYPE material blastn 58083 741 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricostilbomycetes Agaricostilbales Kondoaceae Kondoa Kondoa miscanthi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;