RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA529241" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA529241 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1776117 1776117 PRJNA529241_P_NODE_422502_length_167_cov_1.884615_g420180_i0 PRJNA529241 422502 167 1.884615 3.14730705 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 226 7.799999999999999e-55   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g420180 i0 91.018 521.754491017964 167 15 100 0 1 167 7831133 7831299 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 87133 226 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
5605285 5605285 PRJNA529241_P_NODE_50385_length_288_cov_3.860558_g48063_i0 PRJNA529241 50385 288 3.860558 11.11840704 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 372 1.8e-98   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g48063 i0 90.714 269.121527777778 280 24 97 2 10 288 5033199 5033477 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 77507 372 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
8151478 8151478 PRJNA529241_P_NODE_136227_length_193_cov_1.346154_g133905_i0 PRJNA529241 136227 193 1.346154 2.59807722 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 296 6.96e-76   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g133905 i0 94.301 7.21761658031088 193 11 100 0 1 193 5032513 5032705 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 1393 296 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
10705764 10705764 PRJNA529241_P_NODE_531029_length_151_cov_3.526316_g528707_i0 PRJNA529241 531029 151 3.526316 5.32473716 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 65.8 1.58e-6   NTclustered gi|2874253953|emb|OY970278.1| 3107663 g528707 i0 95.238 0.278145695364238 42 1 28 1 5 46 1445565 1445525 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.10 genome assembly, chromosome: 1 blastn 42 65.8 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;