contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA529241" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3049810 | 3049810 | PRJNA529241_P_NODE_162463_length_180_cov_1.363636_g160141_i0 | PRJNA529241 | 162463 | 180 | 1.363636 | 2.4545448 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 222 | 1.0999999999999999e-53 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g160141 | i0 | 89.011 | 23.9222222222222 | 182 | 16 | 100 | 4 | 1 | 180 | 3043635 | 3043456 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 4306 | 222 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 3052521 | 3052521 | PRJNA529241_P_NODE_494243_length_151_cov_5.385965_g491921_i0 | PRJNA529241 | 494243 | 151 | 5.385965 | 8.13280715 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 121 | 3.33e-23 | NTclustered | gi|2107779373|gb|CP070829.1| | 2448054 | g491921 | i0 | 85.039 | 1.17218543046358 | 127 | 10 | 78 | 6 | 34 | 151 | 2823302 | 2823176 | MAG: Gemmatimonadales bacterium isolate bin109 chromosome | blastn | 177 | 121 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 4326640 | 4326640 | PRJNA529241_P_NODE_288344_length_173_cov_3.720588_g286022_i0 | PRJNA529241 | 288344 | 173 | 3.720588 | 6.43661724 | Gemmatimonas aurantiaca | 173480 | Bacteria | Bacteria | 102 | 1.42e-17 | NTclustered | gi|226088597|dbj|AP009153.1| | 379066 | g286022 | i0 | 91.781 | 0.421965317919075 | 73 | 6 | 42 | 0 | 1 | 73 | 1965620 | 1965548 | Gemmatimonas aurantiaca T-27 DNA, complete genome | blastn | 73 | 102 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 5602725 | 5602725 | PRJNA529241_P_NODE_174005_length_175_cov_1.413043_g171683_i0 | PRJNA529241 | 174005 | 175 | 1.413043 | 2.47282525 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 196 | 6.44e-46 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g171683 | i0 | 86.932 | 16.2457142857143 | 176 | 21 | 100 | 2 | 1 | 175 | 1903553 | 1903379 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 2843 | 196 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 5604804 | 5604804 | PRJNA529241_P_NODE_440505_length_160_cov_1.585366_g438183_i0 | PRJNA529241 | 440505 | 160 | 1.585366 | 2.5365856 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 200 | 4.48e-47 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g438183 | i0 | 89.375 | 8.26875 | 160 | 15 | 99 | 2 | 1 | 159 | 422018 | 422176 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 1323 | 200 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 5604863 | 5604863 | PRJNA529241_P_NODE_446445_length_158_cov_1.157025_g444123_i0 | PRJNA529241 | 446445 | 158 | 1.157025 | 1.8280995 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 180 | 5.74e-41 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g444123 | i0 | 88.312 | 103.075949367089 | 154 | 13 | 96 | 5 | 7 | 158 | 3042472 | 3042622 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 16286 | 180 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 8769305 | 8769305 | PRJNA529241_P_NODE_504987_length_151_cov_4.684211_g502665_i0 | PRJNA529241 | 504987 | 151 | 4.684211 | 7.07315861 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 80.5 | 5.65e-11 | NTclustered | gi|2531976023|emb|OY282356.1| | 2026742 | g502665 | i0 | 97.826 | 1.97350993377483 | 46 | 1 | 30 | 0 | 27 | 72 | 1733088 | 1733043 | MAG: Gemmatimonadota bacterium genome assembly, chromosome: 1 | blastn | 298 | 80.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 10703231 | 10703231 | PRJNA529241_P_NODE_208709_length_173_cov_5.808824_g206387_i0 | PRJNA529241 | 208709 | 173 | 5.808824 | 10.04926552 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 147 | 6.479999999999999e-31 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g206387 | i0 | 78.736 | 1.44508670520231 | 174 | 31 | 100 | 4 | 1 | 173 | 4180518 | 4180686 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 250 | 147 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 10706541 | 10706541 | PRJNA529241_P_NODE_81289_length_237_cov_6.640000_g78967_i0 | PRJNA529241 | 81289 | 237 | 6.64 | 15.7368 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 174 | 4.3499999999999997e-39 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g78967 | i0 | 88.732 | 136.649789029536 | 142 | 16 | 60 | 0 | 69 | 210 | 254523 | 254382 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 32386 | 174 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 13256557 | 13256557 | PRJNA529241_P_NODE_96751_length_220_cov_7.524590_g94429_i0 | PRJNA529241 | 96751 | 220 | 7.52459 | 16.554098 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 63.9 | 9e-6 | NTclustered | gi|2531976028|emb|OY282361.1| | 2910168 | g94429 | i0 | 100 | 3.30454545454545 | 34 | 0 | 15 | 0 | 1 | 34 | 1680035 | 1680002 | MAG: Longimicrobiales bacterium genome assembly, chromosome: 1 | blastn | 727 | 63.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 17077126 | 17077126 | PRJNA529241_P_NODE_298454_length_173_cov_3.566176_g296132_i0 | PRJNA529241 | 298454 | 173 | 3.566176 | 6.16948448 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 111 | 2.36e-20 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g296132 | i0 | 93.333 | 5.54335260115607 | 75 | 5 | 43 | 0 | 98 | 172 | 3678262 | 3678188 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 959 | 111 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 17077782 | 17077782 | PRJNA529241_P_NODE_385054_length_173_cov_2.507353_g382732_i0 | PRJNA529241 | 385054 | 173 | 2.507353 | 4.33772069 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 106 | 1.1e-18 | NTclustered | gi|575462059|gb|CP007130.1| | 861299 | g382732 | i0 | 92 | 0.433526011560694 | 75 | 6 | 43 | 0 | 99 | 173 | 898743 | 898817 | Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence | blastn | 75 | 106 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 24724499 | 24724499 | PRJNA529241_P_NODE_135960_length_193_cov_2.717949_g133638_i0 | PRJNA529241 | 135960 | 193 | 2.717949 | 5.24564157 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 287 | 4.189999999999999e-73 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g133638 | i0 | 94.624 | 143.062176165803 | 186 | 9 | 96 | 1 | 2 | 186 | 3042858 | 3042673 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 27611 | 287 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 24725921 | 24725921 | PRJNA529241_P_NODE_315100_length_173_cov_3.316176_g312778_i0 | PRJNA529241 | 315100 | 173 | 3.316176 | 5.73698448 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 113 | 6.5700000000000005e-21 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g312778 | i0 | 93.421 | 5.87861271676301 | 76 | 5 | 44 | 0 | 1 | 76 | 456406 | 456481 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 1017 | 113 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;