contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA529241" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 499794 | 499794 | PRJNA529241_P_NODE_283681_length_173_cov_3.786765_g281359_i0 | PRJNA529241 | 283681 | 173 | 3.786765 | 6.55110345 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 60.2 | 8.68e-5 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g281359 | i0 | 88 | 0.289017341040462 | 50 | 6 | 29 | 0 | 98 | 147 | 447793 | 447842 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 50 | 60.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 502180 | 502180 | PRJNA529241_P_NODE_580701_length_150_cov_3.442478_g578379_i0 | PRJNA529241 | 580701 | 150 | 3.442478 | 5.163717 | uncultured Bacteriovoracaceae bacterium | 625924 | Bacteria | Bacteria | 71.3 | 3.37e-8 | NTclustered | gi|2874253651|emb|OY968777.1| | 625924 | g578379 | i0 | 90.566 | 0.353333333333333 | 53 | 5 | 35 | 0 | 81 | 133 | 950689 | 950637 | MAG: uncultured Bacteriovoracaceae bacterium isolate MFD03250.bin.c.5 genome assembly, chromosome: 1 | blastn | 53 | 71.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | uncultured Bacteriovoracaceae bacterium | |||
| 3051649 | 3051649 | PRJNA529241_P_NODE_395083_length_173_cov_2.264706_g392761_i0 | PRJNA529241 | 395083 | 173 | 2.264706 | 3.91794138 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 113 | 6.5700000000000005e-21 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g392761 | i0 | 93.421 | 0.867052023121387 | 76 | 5 | 44 | 0 | 98 | 173 | 113248 | 113173 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 150 | 113 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 4944467 | 4944467 | PRJNA529241_P_NODE_506844_length_151_cov_4.578947_g504522_i0 | PRJNA529241 | 506844 | 151 | 4.578947 | 6.91420997 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 100 | 4.34e-17 | NTclustered | gi|1210342126|gb|CP020946.1| | 959 | g504522 | i0 | 80.916 | 6.4635761589404 | 131 | 21 | 87 | 3 | 19 | 149 | 2526187 | 2526061 | Bdellovibrio bacteriovorus strain SSB218315, complete genome | blastn | 976 | 100 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 9428536 | 9428536 | PRJNA529241_P_NODE_355408_length_173_cov_2.808824_g353086_i0 | PRJNA529241 | 355408 | 173 | 2.808824 | 4.85926552 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 108 | 3.06e-19 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g353086 | i0 | 92.105 | 1.92485549132948 | 76 | 6 | 44 | 0 | 1 | 76 | 3254770 | 3254695 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 333 | 108 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 9431001 | 9431001 | PRJNA529241_P_NODE_90588_length_227_cov_2.052632_g88266_i0 | PRJNA529241 | 90588 | 227 | 2.052632 | 4.65947464 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 396 | 8.109999999999997e-106 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g88266 | i0 | 98.238 | 19.3039647577093 | 227 | 3 | 100 | 1 | 1 | 227 | 512380 | 512155 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 4382 | 396 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 15804948 | 15804948 | PRJNA529241_P_NODE_63033_length_263_cov_1.035398_g60711_i0 | PRJNA529241 | 63033 | 263 | 1.035398 | 2.72309674 | Silvanigrella aquatica | 1915309 | Bacteria | Bacteria | 52.8 | 0.024 | NTclustered | gi|1114626566|gb|CP017834.1| | 1915309 | g60711 | i0 | 100 | 0.106463878326996 | 28 | 0 | 11 | 0 | 62 | 89 | 1012600 | 1012627 | Silvanigrella aquatica strain MWH-Nonnen-W8red chromosome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Silvanigrella | Silvanigrella aquatica | ||
| 17077594 | 17077594 | PRJNA529241_P_NODE_361094_length_173_cov_2.757353_g358772_i0 | PRJNA529241 | 361094 | 173 | 2.757353 | 4.77022069 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 91.6 | 3.08e-14 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g358772 | i0 | 88.158 | 0.439306358381503 | 76 | 9 | 44 | 0 | 98 | 173 | 1314264 | 1314189 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 76 | 91.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 18350489 | 18350489 | PRJNA529241_P_NODE_176435_length_174_cov_3.846715_g174113_i0 | PRJNA529241 | 176435 | 174 | 3.846715 | 6.6932841 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 128 | 2.3599999999999997e-25 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g174113 | i0 | 97.333 | 0.431034482758621 | 75 | 2 | 43 | 0 | 99 | 173 | 2756274 | 2756200 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 75 | 128 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 20903798 | 20903798 | PRJNA529241_P_NODE_516357_length_151_cov_4.105263_g514035_i0 | PRJNA529241 | 516357 | 151 | 4.105263 | 6.19894713 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 117 | 4.31e-22 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g514035 | i0 | 95.833 | 0.95364238410596 | 72 | 3 | 48 | 0 | 5 | 76 | 489790 | 489861 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 144 | 117 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 22176891 | 22176891 | PRJNA529241_P_NODE_343158_length_173_cov_2.970588_g340836_i0 | PRJNA529241 | 343158 | 173 | 2.970588 | 5.13911724 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 99 | 1.84e-16 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g340836 | i0 | 91.549 | 0.410404624277457 | 71 | 6 | 41 | 0 | 3 | 73 | 114396 | 114466 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 71 | 99 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;