contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA529224" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 498018 | 498018 | PRJNA529224_S_NODE_761_length_229_cov_6.725000_g754_i0 | PRJNA529224 | 761 | 229 | 6.725 | 15.40025 | Pirellula sp. SH-Sr6A | 1632865 | Bacteria | Bacteria | 424 | 3.76e-114 | NTclustered | gi|1015448679|gb|CP011272.1| | 1632865 | g754 | i0 | 100 | 86.3144104803494 | 229 | 0 | 100 | 0 | 1 | 229 | 3097108 | 3096880 | Pirellula sp. SH-Sr6A, complete genome | blastn | 19766 | 424 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellula | Pirellula sp. SH-Sr6A | |
| 1773173 | 1773173 | PRJNA529224_S_NODE_22_length_663_cov_700.031546_g18_i0 | PRJNA529224 | 22 | 663 | 700.031546 | 4641.20914998 | Nibricoccus sp. IMCC34717 | 3034021 | Bacteria | Bacteria | 1122 | 0 | NTclustered | gi|2850969968|gb|CP119759.1| | 3034021 | g18 | i0 | 97.277 | 174.601809954751 | 661 | 18 | 99 | 0 | 3 | 663 | 1405536 | 1406196 | Nibricoccus sp. IMCC34717 chromosome, complete genome | blastn | 115761 | 1122 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus sp. IMCC34717 | |
| 4324919 | 4324919 | PRJNA529224_S_NODE_1804_length_156_cov_5.480315_g1797_i0 | PRJNA529224 | 1804 | 156 | 5.480315 | 8.5492914 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 233 | 4.2799999999999995e-57 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g1797 | i0 | 93.631 | 206.916666666667 | 157 | 9 | 100 | 1 | 1 | 156 | 1868738 | 1868582 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 32279 | 233 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 5601788 | 5601788 | PRJNA529224_S_NODE_345_length_315_cov_66.335664_g338_i0 | PRJNA529224 | 345 | 315 | 66.335664 | 208.9573416 | Nibricoccus sp. IMCC34717 | 3034021 | Bacteria | Bacteria | 383 | 9.21e-102 | NTclustered | gi|2850969968|gb|CP119759.1| | 3034021 | g338 | i0 | 90.169 | 60.615873015873 | 295 | 27 | 93 | 2 | 1 | 294 | 1404113 | 1403820 | Nibricoccus sp. IMCC34717 chromosome, complete genome | blastn | 19094 | 383 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus sp. IMCC34717 | |
| 8151008 | 8151008 | PRJNA529224_S_NODE_7_length_968_cov_37.823216_g3_i1 | PRJNA529224 | 7 | 968 | 37.823216 | 366.12873088 | Nibricoccus sp. IMCC34717 | 3034021 | Bacteria | Bacteria | 1504 | 0 | NTclustered | gi|2850969968|gb|CP119759.1| | 3034021 | g3 | i1 | 94.753 | 114.667355371901 | 972 | 41 | 100 | 8 | 1 | 968 | 1403939 | 1404904 | Nibricoccus sp. IMCC34717 chromosome, complete genome | blastn | 110998 | 1504 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus sp. IMCC34717 | |
| 9426220 | 9426220 | PRJNA529224_S_NODE_1808_length_156_cov_4.527559_g1801_i0 | PRJNA529224 | 1808 | 156 | 4.527559 | 7.06299204 | Pirellula sp. SH-Sr6A | 1632865 | Bacteria | Bacteria | 289 | 9e-74 | NTclustered | gi|1015448679|gb|CP011272.1| | 1632865 | g1801 | i0 | 100 | 20.4230769230769 | 156 | 0 | 100 | 0 | 1 | 156 | 3096609 | 3096454 | Pirellula sp. SH-Sr6A, complete genome | blastn | 3186 | 289 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellula | Pirellula sp. SH-Sr6A | |
| 9426238 | 9426238 | PRJNA529224_S_NODE_8_length_879_cov_25.443529_g3_i2 | PRJNA529224 | 8 | 879 | 25.443529 | 223.64861991 | Termitidicoccus mucosus | 1184151 | Bacteria | Bacteria | 1182 | 0 | NTclustered | gi|2724066732|gb|CP109796.1| | 1184151 | g3 | i2 | 91.053 | 120.130830489192 | 883 | 67 | 99 | 9 | 3 | 878 | 5638086 | 5637209 | Termitidicoccus mucosus strain TSB47 chromosome, complete genome | blastn | 105595 | 1182 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Termitidicoccus | Termitidicoccus mucosus | |
| 10043029 | 10043029 | PRJNA529224_S_NODE_28_length_627_cov_31.382943_g3_i3 | PRJNA529224 | 28 | 627 | 31.382943 | 196.77105261 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 1002 | 0 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g3 | i3 | 95.534 | 108.133971291866 | 627 | 27 | 99 | 1 | 2 | 627 | 5152986 | 5153612 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 67800 | 1002 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 10702008 | 10702008 | PRJNA529224_S_NODE_49_length_540_cov_49.870841_g44_i0 | PRJNA529224 | 49 | 540 | 49.870841 | 269.3025414 | Saltatorellus ferox | 2528018 | Bacteria | Bacteria | 414 | 5.88e-111 | NTclustered | gi|1712682957|gb|CP036434.1| | 2528018 | g44 | i0 | 80.776 | 395.037037037037 | 541 | 95 | 99 | 8 | 4 | 540 | 2930713 | 2931248 | Planctomycetes bacterium Poly30 chromosome, complete genome | blastn | 213320 | 414 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Saltatorellus | Saltatorellus ferox | |||
| 11976749 | 11976749 | PRJNA529224_S_NODE_470_length_281_cov_31.511905_g463_i0 | PRJNA529224 | 470 | 281 | 31.511905 | 88.54845305 | Nibricoccus sp. IMCC34717 | 3034021 | Bacteria | Bacteria | 324 | 4.97e-84 | NTclustered | gi|2850969968|gb|CP119759.1| | 3034021 | g463 | i0 | 87.544 | 89.4519572953737 | 281 | 33 | 99 | 2 | 2 | 281 | 1403834 | 1404113 | Nibricoccus sp. IMCC34717 chromosome, complete genome | blastn | 25136 | 324 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus sp. IMCC34717 | |
| 13868266 | 13868266 | PRJNA529224_S_NODE_1131_length_196_cov_5.173653_g1124_i0 | PRJNA529224 | 1131 | 196 | 5.173653 | 10.14035988 | Planctomycetia | 203683 | Bacteria | Bacteria | 305 | 1.18e-78 | NTclustered | gi|1133581311|gb|CP019082.1| | 1387353 | g1124 | i0 | 96.237 | 90.3571428571429 | 186 | 7 | 95 | 0 | 8 | 193 | 122783 | 122968 | Paludisphaera borealis strain PX4 chromosome, complete genome | blastn | 17710 | 305 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Paludisphaera | Paludisphaera borealis | |
| 15142603 | 15142603 | PRJNA529224_S_NODE_912_length_214_cov_8.081081_g905_i0 | PRJNA529224 | 912 | 214 | 8.081081 | 17.29351334 | Isosphaera | 127 | Bacteria | Bacteria | 263 | 8.000000000000002e-66 | NTclustered | gi|470487262|ref|NR_076810.1| | 128 | g905 | i0 | 88.837 | 36.9626168224299 | 215 | 23 | 100 | 1 | 1 | 214 | 1320 | 1106 | Isosphaera pallida strain IS1B 23S ribosomal RNA gene, complete sequence | blastn | 7910 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaera | Isosphaera pallida | |
| 15800628 | 15800628 | PRJNA529224_S_NODE_593_length_253_cov_29.928571_g586_i0 | PRJNA529224 | 593 | 253 | 29.928571 | 75.71928463 | Nibricoccus sp. IMCC34717 | 3034021 | Bacteria | Bacteria | 357 | 4.34e-94 | NTclustered | gi|2850969968|gb|CP119759.1| | 3034021 | g586 | i0 | 92.4 | 60.4901185770751 | 250 | 19 | 99 | 0 | 1 | 250 | 1403835 | 1403586 | Nibricoccus sp. IMCC34717 chromosome, complete genome | blastn | 15304 | 357 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus sp. IMCC34717 | |
| 19624006 | 19624006 | PRJNA529224_S_NODE_416_length_295_cov_14.150376_g409_i0 | PRJNA529224 | 416 | 295 | 14.150376 | 41.7436092 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 163 | 1.21e-35 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g409 | i0 | 84.706 | 39.0610169491525 | 170 | 18 | 56 | 7 | 1 | 165 | 1867830 | 1867664 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 11523 | 163 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 20900142 | 20900142 | PRJNA529224_S_NODE_457_length_284_cov_1674.466667_g450_i0 | PRJNA529224 | 457 | 284 | 1674.466667 | 4755.48533428 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 385 | 2.28e-102 | NTclustered | gi|2518556548|emb|OX638380.1| | 412056 | g450 | i0 | 92.251 | 224.964788732394 | 271 | 21 | 95 | 0 | 1 | 271 | 3921400 | 3921130 | MAG: uncultured Verrucomicrobiae bacterium isolate efd5e50e-5b6a-4a0f-a0a2-e496bae301b3 genome assembly, chromosome: 1 | blastn | 63890 | 385 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 21516432 | 21516432 | PRJNA529224_S_NODE_1157_length_194_cov_6.642424_g1150_i0 | PRJNA529224 | 1157 | 194 | 6.642424 | 12.88630256 | Isosphaera | 127 | Bacteria | Bacteria | 246 | 7.159999999999999e-61 | NTclustered | gi|470487262|ref|NR_076810.1| | 128 | g1150 | i0 | 90.811 | 118.840206185567 | 185 | 16 | 95 | 1 | 2 | 185 | 567 | 383 | Isosphaera pallida strain IS1B 23S ribosomal RNA gene, complete sequence | blastn | 23055 | 246 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaera | Isosphaera pallida | |
| 21516461 | 21516461 | PRJNA529224_S_NODE_597_length_252_cov_147.524664_g590_i0 | PRJNA529224 | 597 | 252 | 147.524664 | 371.76215328 | Opitutaceae | 134623 | Bacteria | Bacteria | 442 | 1.1599999999999995e-119 | NTclustered | gi|1933068931|gb|MW261879.1| | 1913982 | g590 | i0 | 98.406 | 99.6071428571429 | 251 | 4 | 99 | 0 | 2 | 252 | 283 | 533 | Opitutus sp. strain IMCC34717 16S ribosomal RNA gene, partial sequence | blastn | 25101 | 442 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. | |
| 22791609 | 22791609 | PRJNA529224_S_NODE_258_length_351_cov_307.083851_g251_i0 | PRJNA529224 | 258 | 351 | 307.083851 | 1077.86431701 | Opitutaceae | 134623 | Bacteria | Bacteria | 527 | 4.519999999999999e-145 | NTclustered | gi|336181172|gb|JF922312.1| | 1045324 | g251 | i0 | 96.285 | 97.6210826210826 | 323 | 8 | 91 | 4 | 30 | 350 | 1 | 321 | Opitutus sp. WS3(2011) 16S ribosomal RNA gene, partial sequence | blastn | 34265 | 527 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. WS3(2011) |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;