RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA527965" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA527965 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1114274 1114274 PRJNA527965_S_NODE_3181_length_213_cov_5.696629_g3098_i0 PRJNA527965 3181 213 5.696629 12.13381977 Asplanchna 84396 Rotifera other_Eukaryota 370 4.5599999999999996e-98   NTclustered gi|6456035|gb|AF092434.1|AF092434 84397 g3098 i0 98.122 99.906103286385 213 2 99 2 2 213 640 851 Asplanchna sieboldi 18S ribosomal RNA gene, complete sequence blastn 21280 372 0.99462365591397806 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sieboldii
1772111 1772111 PRJNA527965_S_NODE_5982_length_153_cov_1.847458_g5899_i0 PRJNA527965 5982 153 1.847458 2.82661074 Rotaria rotatoria 231624 Rotifera other_Eukaryota 283 4.0799999999999995e-72   NTclustered gi|72153762|gb|DQ089743.1| 231624 g5899 i0 100 25.4705882352941 153 0 100 0 1 153 1501 1653 Rotaria rotatoria 28S ribosomal RNA gene, partial sequence blastn 3897 283 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
3665604 3665604 PRJNA527965_S_NODE_6183_length_151_cov_1.543103_g6100_i0 PRJNA527965 6183 151 1.543103 2.33008553 Lecane 96445 Rotifera other_Eukaryota 206 8.94e-49   NTclustered gi|61200802|gb|AY829083.1| 96446 g6100 i0 91.333 49.1854304635762 150 13 99 0 2 151 1273 1124 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 7427 206 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
4323813 4323813 PRJNA527965_S_NODE_3504_length_203_cov_4.970238_g3421_i0 PRJNA527965 3504 203 4.970238 10.08958314 Asplanchna sieboldii 84397 Rotifera other_Eukaryota 333 5.639999999999999e-87   NTclustered gi|61200811|gb|AY829085.1| 84397 g3421 i0 96.517 18.1034482758621 201 7 99 0 1 201 1528 1728 Asplanchna sieboldi 28S ribosomal RNA gene, partial sequence blastn 3675 333 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sieboldii
4942564 4942564 PRJNA527965_S_NODE_4104_length_187_cov_1.763158_g4021_i0 PRJNA527965 4104 187 1.763158 3.29710546 Metazoa 33208 Rotifera other_Eukaryota 337 3.95e-88   NTclustered gi|1399047|gb|U41281.1|PAU41281 44582 g4021 i0 99.459 98.9465240641711 185 1 99 0 1 185 227 411 Philodina acuticornis 18S rRNA gene blastn 18503 337 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina acuticornis
19622900 19622900 PRJNA527965_S_NODE_3176_length_213_cov_10.848315_g3093_i0 PRJNA527965 3176 213 10.848315 23.10691095 Brachionus urceolaris 204736 Rotifera other_Eukaryota 344 2.76e-90   NTclustered gi|72153738|gb|DQ089740.1| 204736 g3093 i0 95.775 95.6525821596244 213 9 100 0 1 213 2311 2523 Brachionus urceolaris 28S ribosomal RNA gene, partial sequence blastn 20374 344 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus urceolaris
24722888 24722888 PRJNA527965_S_NODE_1880_length_285_cov_4.204000_g1797_i0 PRJNA527965 1880 285 4.204 11.9814 Brachionus urceolaris 204736 Rotifera other_Eukaryota 379 1.06e-100   NTclustered gi|72153738|gb|DQ089740.1| 204736 g1797 i0 90.69 47.7964912280702 290 20 100 5 1 285 2092 1805 Brachionus urceolaris 28S ribosomal RNA gene, partial sequence blastn 13622 379 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus urceolaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;