RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA527965" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA527965 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10700852 10700852 PRJNA527965_S_NODE_2869_length_226_cov_1.612565_g2786_i0 PRJNA527965 2869 226 1.612565 3.6443969 Pacifides sp. n. ML-2020 2771503 Platyhelminthes Platyhelminthes 87.9 5.51e-13   NTclustered gi|1900854572|gb|MT994578.1| 2771503 g2786 i0 81.25 4.64159292035398 112 18 49 3 89 198 210 320 Pacifides sp. n. ML-2020 isolate ML3 large subunit ribosomal RNA gene, partial sequence blastn 1049 87.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Cercyridae Pacifides Pacifides sp. n. ML-2020
23449278 23449278 PRJNA527965_S_NODE_4579_length_176_cov_0.971631_g4496_i0 PRJNA527965 4579 176 0.971631 1.71007056 Procerodes littoralis 67583 Platyhelminthes Platyhelminthes 67.6 5.3e-7   NTclustered gi|109631065|gb|DQ665985.1| 67583 g4496 i0 93.333 1.80681818181818 45 3 26 0 84 128 1189 1145 Procerodes littoralis 28S ribosomal RNA gene, partial sequence blastn 318 67.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Procerodidae Procerodes Procerodes littoralis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;