RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA526367" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA526367 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13249824 13249824 PRJNA526367_P_NODE_36491_length_189_cov_4.571429_g36281_i0 PRJNA526367 36491 189 4.571429 8.64000081 Asplanchna sieboldii 84397 Rotifera other_Eukaryota 315 1.8699999999999998e-81   NTclustered gi|61200811|gb|AY829085.1| 84397 g36281 i0 97.297 16.4338624338624 185 5 98 0 1 185 1715 1531 Asplanchna sieboldi 28S ribosomal RNA gene, partial sequence blastn 3106 315 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sieboldii
20240229 20240229 PRJNA526367_P_NODE_38816_length_185_cov_3.286765_g38606_i0 PRJNA526367 38816 185 3.286765 6.08051525 Eurotatoria 2816136 Rotifera other_Eukaryota 327 2.34e-85   NTclustered gi|72153731|gb|DQ089739.1| 104782 g38606 i0 99.444 94.9891891891892 180 1 97 0 5 184 694 515 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 17573 327 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
20898162 20898162 PRJNA526367_P_NODE_40757_length_181_cov_8.378788_g40547_i0 PRJNA526367 40757 181 8.378788 15.16560628 Asplanchna sieboldii 84397 Rotifera other_Eukaryota 196 6.709999999999999e-46   NTclustered gi|61200811|gb|AY829085.1| 84397 g40547 i0 86.667 0.994475138121547 180 20 97 2 6 181 1832 2011 Asplanchna sieboldi 28S ribosomal RNA gene, partial sequence blastn 180 196 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sieboldii
24065607 24065607 PRJNA526367_P_NODE_34199_length_209_cov_44.900000_g33989_i0 PRJNA526367 34199 209 44.9 93.841 Ploima 84394 Rotifera other_Eukaryota 387 4.42e-103   NTclustered gi|1845957847|gb|MT522671.1| 47121 g33989 i0 100 100 209 0 100 0 1 209 717 925 Notommata copeus isolate JH_005H10 small subunit ribosomal RNA gene, partial sequence blastn 20900 387 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Notommatidae Notommata Notommata copeus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;