contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA526367" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4322704 | 4322704 | PRJNA526367_P_NODE_23704_length_324_cov_2.123636_g23495_i0 | PRJNA526367 | 23704 | 324 | 2.123636 | 6.88058064 | Pseudogemmatithrix spongiicola | 3062599 | Bacteria | Bacteria | 132 | 3.8e-26 | NTclustered | gi|2557479348|gb|CP130613.1| | 3062599 | g23495 | i0 | 98.649 | 19.4413580246914 | 74 | 1 | 23 | 0 | 27 | 100 | 2157487 | 2157560 | Pseudogemmatithrix spongiicola strain 318 chromosome, complete genome | blastn | 6299 | 132 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Pseudogemmatithrix | Pseudogemmatithrix spongiicola | |
| 6873859 | 6873859 | PRJNA526367_P_NODE_49806_length_167_cov_6.152542_g49596_i0 | PRJNA526367 | 49806 | 167 | 6.152542 | 10.27474514 | Gemmatimonas phototrophica | 1379270 | Bacteria | Bacteria | 180 | 6.16e-41 | NTclustered | gi|1015602748|gb|CP011454.1| | 1379270 | g49596 | i0 | 87.421 | 0.952095808383233 | 159 | 16 | 94 | 3 | 8 | 164 | 4680175 | 4680331 | Gemmatimonas phototrophica strain AP64, complete genome | blastn | 159 | 180 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas phototrophica | |
| 13867322 | 13867322 | PRJNA526367_P_NODE_22431_length_324_cov_2.232727_g22222_i0 | PRJNA526367 | 22431 | 324 | 2.232727 | 7.23403548 | Gemmatimonas | 173479 | Bacteria | Bacteria | 185 | 2.88e-42 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g22222 | i0 | 100 | 68.0246913580247 | 100 | 0 | 60 | 0 | 1 | 100 | 2480 | 2381 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 22040 | 185 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 13867540 | 13867540 | PRJNA526367_P_NODE_35891_length_190_cov_5.354610_g35681_i0 | PRJNA526367 | 35891 | 190 | 5.35461 | 10.173759 | Gemmatimonas | 173479 | Bacteria | Bacteria | 217 | 5.469999999999999e-52 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g35681 | i0 | 88.764 | 8.74210526315789 | 178 | 18 | 93 | 2 | 1 | 177 | 1319 | 1495 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 1661 | 217 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 14524720 | 14524720 | PRJNA526367_P_NODE_22272_length_324_cov_2.247273_g22063_i0 | PRJNA526367 | 22272 | 324 | 2.247273 | 7.28116452 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 117 | 1.06e-21 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g22063 | i0 | 89.362 | 0.867283950617284 | 94 | 8 | 29 | 2 | 227 | 319 | 3045172 | 3045264 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 281 | 117 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 15798727 | 15798727 | PRJNA526367_P_NODE_43533_length_177_cov_2.085938_g43323_i0 | PRJNA526367 | 43533 | 177 | 2.085938 | 3.69211026 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 230 | 6.439999999999999e-56 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g43323 | i0 | 90.751 | 11.9717514124294 | 173 | 15 | 97 | 1 | 6 | 177 | 6466279 | 6466107 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 2119 | 230 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 16416436 | 16416436 | PRJNA526367_P_NODE_34353_length_207_cov_5.911392_g34143_i0 | PRJNA526367 | 34353 | 207 | 5.911392 | 12.23658144 | Gemmatimonas | 173479 | Bacteria | Bacteria | 147 | 8.08e-31 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g34143 | i0 | 79.902 | 4.71497584541063 | 204 | 38 | 98 | 3 | 1 | 202 | 400 | 198 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 976 | 147 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 18965203 | 18965203 | PRJNA526367_P_NODE_29855_length_324_cov_1.483636_g29646_i0 | PRJNA526367 | 29855 | 324 | 1.483636 | 4.80698064 | Gemmatimonas | 173479 | Bacteria | Bacteria | 165 | 3.75e-36 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g29646 | i0 | 96.939 | 8 | 98 | 3 | 30 | 0 | 227 | 324 | 389 | 486 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 2592 | 165 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;