RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA526367" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA526367 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3046746 3046746 PRJNA526367_P_NODE_21543_length_324_cov_2.309091_g21334_i0 PRJNA526367 21543 324 2.309091 7.48145484 Platynereis dumerilii 6359 Annelida Annelida 54.7 0.008   NTclustered gi|146189520|emb|AM697674.1| 6359 g21334 i0 100 0.0895061728395062 29 0 9 0 1 29 146 174 Platynereis dumerilii mRNA for hypothetical protein (ORF1), isolate 2 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
4942016 4942016 PRJNA526367_P_NODE_4064_length_345_cov_3.621622_g3856_i0 PRJNA526367 4064 345 3.621622 12.4945959 Metazoa 33208 Annelida Annelida 54.7 0.009   NTclustered gi|146189520|emb|AM697674.1| 6359 g3856 i0 100 0.582608695652174 29 0 8 0 1 29 176 204 Platynereis dumerilii mRNA for hypothetical protein (ORF1), isolate 2 blastn 201 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
11974608 11974608 PRJNA526367_P_NODE_27850_length_324_cov_1.770909_g27641_i0 PRJNA526367 27850 324 1.770909 5.73774516 Platynereis dumerilii 6359 Annelida Annelida 56.5 0.002   NTclustered gi|146189520|emb|AM697674.1| 6359 g27641 i0 100 0.0925925925925926 30 0 9 0 1 30 146 175 Platynereis dumerilii mRNA for hypothetical protein (ORF1), isolate 2 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
16416524 16416524 PRJNA526367_P_NODE_4113_length_345_cov_3.060811_g3905_i0 PRJNA526367 4113 345 3.060811 10.55979795 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.7 0.009   NTclustered gi|146189520|emb|AM697674.1| 6359 g3905 i0 100 0.756521739130435 29 0 8 0 317 345 71 99 Platynereis dumerilii mRNA for hypothetical protein (ORF1), isolate 2 blastn 261 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
18965295 18965295 PRJNA526367_P_NODE_34635_length_203_cov_4.681818_g34425_i0 PRJNA526367 34635 203 4.681818 9.50409054 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 0.018   NTclustered gi|146189520|emb|AM697674.1| 6359 g34425 i0 100 1.24137931034483 28 0 14 0 1 28 99 72 Platynereis dumerilii mRNA for hypothetical protein (ORF1), isolate 2 blastn 252 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;