contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA526367" and tax_phylum = "Acidobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 496316 | 496316 | PRJNA526367_P_NODE_57581_length_161_cov_2.375000_g57371_i0 | PRJNA526367 | 57581 | 161 | 2.375 | 3.82375 | uncultured Acidobacteriaceae bacterium | 194844 | Bacteria | Bacteria | 132 | 1.6700000000000002e-26 | NTclustered | gi|2874254114|emb|OY970199.1| | 194844 | g57371 | i0 | 83.217 | 0.88819875776397506 | 143 | 24 | 89 | 0 | 15 | 157 | 3310862 | 3311004 | MAG: uncultured Acidobacteriaceae bacterium isolate MFD04463.bin.1.15 genome assembly, chromosome: 1 | blastn | 143 | 132 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | uncultured Acidobacteriaceae bacterium | |||
| 3047068 | 3047068 | PRJNA526367_P_NODE_44943_length_174_cov_7.760000_g44733_i0 | PRJNA526367 | 44943 | 174 | 7.76 | 13.5024 | Terriglobus roseus | 392734 | Bacteria | Bacteria | 259 | 8.04e-65 | NTclustered | gi|390410848|gb|CP003379.1| | 926566 | g44733 | i0 | 93.642 | 26.235632183908 | 173 | 11 | 99 | 0 | 2 | 174 | 927073 | 926901 | Terriglobus roseus DSM 18391, complete genome | blastn | 4565 | 259 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Terriglobus | Terriglobus roseus | ||
| 6873889 | 6873889 | PRJNA526367_P_NODE_51306_length_166_cov_3.179487_g51096_i0 | PRJNA526367 | 51306 | 166 | 3.179487 | 5.27794842 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 78.7 | 2.29e-10 | NTclustered | gi|112980875|gb|DQ829679.1| | 171953 | g51096 | i0 | 94.118 | 8.06024096385542 | 51 | 3 | 31 | 0 | 42 | 92 | 439 | 389 | Uncultured Acidobacteria bacterium clone DON5 23S ribosomal RNA gene, partial sequence | blastn | 1338 | 78.7 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 9424253 | 9424253 | PRJNA526367_P_NODE_41548_length_180_cov_4.343511_g41338_i0 | PRJNA526367 | 41548 | 180 | 4.343511 | 7.8183198 | Geothrix oryzae | 2927975 | Bacteria | Bacteria | 259 | 8.38e-65 | NTclustered | gi|2490888707|dbj|AP027079.1| | 2927975 | g41338 | i0 | 93.678 | 0.966666666666667 | 174 | 10 | 96 | 1 | 5 | 177 | 1798700 | 1798873 | Geothrix oryzae Red222 DNA, complete genome | blastn | 174 | 259 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix oryzae | ||
| 9424549 | 9424549 | PRJNA526367_P_NODE_61688_length_156_cov_3.121495_g61478_i0 | PRJNA526367 | 61688 | 156 | 3.121495 | 4.8695322 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 104 | 3.5e-18 | NTclustered | gi|76574293|gb|DQ139441.1| | 171953 | g61478 | i0 | 83.929 | 8.8525641025641 | 112 | 15 | 71 | 3 | 25 | 135 | 1393 | 1502 | Uncultured Acidobacteria bacterium clone CAL1 23S ribosomal RNA gene, partial sequence | blastn | 1381 | 104 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 10700195 | 10700195 | PRJNA526367_P_NODE_54809_length_163_cov_4.938596_g54599_i0 | PRJNA526367 | 54809 | 163 | 4.938596 | 8.04991148 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 126 | 7.89e-25 | NTclustered | gi|2874253744|emb|OY969603.1| | 171953 | g54599 | i0 | 82.192 | 21.0552147239264 | 146 | 26 | 90 | 0 | 13 | 158 | 481805 | 481660 | MAG: uncultured Acidobacteriota bacterium isolate MFD01476.bin.c.1 genome assembly, chromosome: 1 | blastn | 3432 | 126 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 13249743 | 13249743 | PRJNA526367_P_NODE_29451_length_324_cov_1.614545_g29242_i0 | PRJNA526367 | 29451 | 324 | 1.614545 | 5.2311258 | Tunturiibacter empetritectus | 3069691 | Bacteria | Bacteria | 75 | 6.5e-9 | NTclustered | gi|2750692779|gb|CP132932.1| | 3069691 | g29242 | i0 | 86.567 | 0.608024691358025 | 67 | 9 | 21 | 0 | 19 | 85 | 2043125 | 2043059 | Tunturiibacter empetritectus strain M8UP23 chromosome | blastn | 197 | 75 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Tunturiibacter | Tunturiibacter empetritectus | ||
| 19621898 | 19621898 | PRJNA526367_P_NODE_28396_length_324_cov_1.727273_g28187_i0 | PRJNA526367 | 28396 | 324 | 1.727273 | 5.59636452 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 130 | 1.37e-25 | NTclustered | gi|112980863|gb|DQ829667.1| | 171953 | g28187 | i0 | 91.489 | 26.5895061728395 | 94 | 8 | 29 | 0 | 7 | 100 | 36 | 129 | Uncultured Acidobacteria bacterium clone DON17 23S ribosomal RNA gene, partial sequence | blastn | 8615 | 130 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 23448803 | 23448803 | PRJNA526367_P_NODE_8819_length_324_cov_3.905455_g8610_i0 | PRJNA526367 | 8819 | 324 | 3.905455 | 12.6536742 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 167 | 1.0400000000000001e-36 | NTclustered | gi|217038899|gb|EU810989.1| | 171953 | g8610 | i0 | 96.97 | 26.6913580246914 | 99 | 3 | 31 | 0 | 226 | 324 | 118 | 20 | Uncultured Acidobacteria bacterium clone 01QD9 23S ribosomal RNA gene, partial sequence | blastn | 8648 | 167 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 24721870 | 24721870 | PRJNA526367_P_NODE_23100_length_324_cov_2.170909_g22891_i0 | PRJNA526367 | 23100 | 324 | 2.170909 | 7.03374516 | Bryobacterales bacterium F-183 | 2802972 | Bacteria | Bacteria | 143 | 1.76e-29 | NTclustered | gi|2131941663|dbj|AP025252.1| | 2802972 | g22891 | i0 | 94.565 | 4.09876543209877 | 92 | 5 | 28 | 0 | 9 | 100 | 634888 | 634797 | Bryobacterales bacterium F-183 DNA, nearly complete genome | blastn | 1328 | 143 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacterales bacterium F-183 | ||||
| 24722373 | 24722373 | PRJNA526367_P_NODE_58560_length_160_cov_4.918919_g58350_i0 | PRJNA526367 | 58560 | 160 | 4.918919 | 7.8702704 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 235 | 1.23e-57 | NTclustered | gi|117557517|emb|AM180906.2| | 171953 | g58350 | i0 | 94.737 | 195.85625 | 152 | 7 | 95 | 1 | 8 | 159 | 709 | 859 | Uncultured Acidobacteria bacterium partial 23S rRNA gene, clone UD6 LS_LKC22_kan3 | blastn | 31337 | 235 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;