RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA526367" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA526367 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1771226 1771226 PRJNA526367_P_NODE_4202_length_344_cov_2.759322_g3994_i0 PRJNA526367 4202 344 2.759322 9.49206768 Iflavirus sp. 1916690 Viruses Viruses 54.7 0.009   NTclustered gi|2895513773|tpg|BK068507.1| 1916690 g3994 i0 100 0.328488372093023 29 0 8 0 316 344 9336 9364 TPA_asm: Iflavirus sp. isolate WUR36 polyprotein gene, complete cds blastn 113 54.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
4322932 4322932 PRJNA526367_P_NODE_42044_length_179_cov_5.100000_g41834_i0 PRJNA526367 42044 179 5.1 9.129 Skokie dicistro-like virus 2789443 Viruses Viruses 294 2.28e-75   NTclustered gi|2806502719|gb|PQ054859.1| 2789443 g41834 i0 98.214 1.87709497206704 168 3 94 0 5 172 4834 4667 MAG: Skokie dicistro-like virus isolate QJ5MS4721 genomic sequence blastn 336 294 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
15798641 15798641 PRJNA526367_P_NODE_37153_length_188_cov_2.489209_g36943_i0 PRJNA526367 37153 188 2.489209 4.67971292 Cherry virus Trakiya 2074132 Viruses Viruses 287 4.06e-73   NTclustered gi|2187015282|gb|OK181162.1| 2074132 g36943 i0 95.055 0.968085106382979 182 9 97 0 7 188 1245 1426 Cherry virus Trakiya strain CVT-A, complete genome blastn 182 287 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Cherry virus Trakiya
17073539 17073539 PRJNA526367_P_NODE_57454_length_161_cov_3.803571_g57244_i0 PRJNA526367 57454 161 3.803571 6.12374931 Ripathug virus 3131450 Viruses Viruses 165 1.65e-36   NTclustered gi|2717322555|gb|PP173752.1| 3131450 g57244 i0 88.321 209.614906832298 137 16 85 0 2 138 4342 4478 MAG: Ripathug virus isolate RCCP2_k141_20704 genomic sequence blastn 33748 165 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripathug virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;