RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA526367" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA526367 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4322998 4322998 PRJNA526367_P_NODE_47184_length_171_cov_4.172131_g46974_i0 PRJNA526367 47184 171 4.172131 7.13434401 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 121 3.87e-23   NTclustered gi|2874254017|emb|OY970342.1| 2212470 g46974 i0 85.47 61.5964912280702 117 15 68 2 36 151 3543640 3543755 MAG: Candidatus Eisenbacteria bacterium isolate MFD02242.bin.c.1 genome assembly, chromosome: 1 blastn 10533 121 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
6217420 6217420 PRJNA526367_P_NODE_51265_length_166_cov_3.521368_g51055_i0 PRJNA526367 51265 166 3.521368 5.84547088 Candidatus Nanosynbacter 2093823 Bacteria Bacteria 283 4.53e-72   NTclustered gi|734569044|gb|CP007496.1| 2093824 g51055 i0 98.742 1.91566265060241 159 2 96 0 8 166 691087 690929 Candidatus Nanosynbacter lyticus strain TM7x chromosome, complete genome blastn 318 283 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter lyticus
8766395 8766395 PRJNA526367_P_NODE_13847_length_324_cov_3.036364_g13638_i0 PRJNA526367 13847 324 3.036364 9.83781936 Candidatus Saccharimonadia 2093818 Bacteria Bacteria 185 2.88e-42   NTclustered gi|1842055115|gb|CP040000.1| 713059 g13638 i0 100 51.9413580246914 100 0 60 0 225 324 148162 148261 Candidatus Saccharibacteria bacterium oral taxon 488 strain FS03P chromosome, complete genome blastn 16829 185 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
9424592 9424592 PRJNA526367_P_NODE_65428_length_151_cov_5.921569_g65218_i0 PRJNA526367 65428 151 5.921569 8.94156919 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 183 4.19e-42   NTclustered gi|1958002018|gb|CP064958.1| 2052152 g65218 i0 90.714 40.9668874172185 140 9 91 4 10 147 136952 136815 MAG: Candidatus Nomurabacteria bacterium isolate AalW_18-Q3-R10-53_BAT3C.395 chromosome, complete genome blastn 6186 183 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
19622377 19622377 PRJNA526367_P_NODE_64636_length_152_cov_5.766990_g64426_i0 PRJNA526367 64636 152 5.76699 8.7658248 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 255 8.83e-64   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g64426 i0 99.291 3.68421052631579 141 1 93 0 8 148 891160 891300 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 560 255 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
23448727 23448727 PRJNA526367_P_NODE_62619_length_154_cov_9.085714_g62409_i0 PRJNA526367 62619 154 9.085714 13.99199956 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 143 7.289999999999999e-30   NTclustered gi|2306681518|gb|CP075337.1| 2980174 g62409 i0 84.564 0.967532467532468 149 18 96 3 4 151 368841 368697 Candidatus Saccharibacteria bacterium TM7i chromosome, complete genome blastn 149 143 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;