RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA520845" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA520845 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13864940 13864940 PRJNA520845_P_NODE_117731_length_343_cov_2.625926_g116232_i0 PRJNA520845 117731 343 2.625926 9.00692618 Fungi 4751 Fungi Fungi 217 1.09e-51   NTclustered gi|2028320666|ref|XM_040889247.1| 61395 g116232 i0 82.4 74.2857142857143 250 42 73 2 87 335 1 249 Linderina pennispora 60S ribosomal protein L11 (DL89DRAFT_274988), partial mRNA blastn 25480 219 0.990867579908676 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
14519085 14519085 PRJNA520845_P_NODE_210572_length_253_cov_1.283333_g209073_i0 PRJNA520845 210572 253 1.283333 3.24683249 Linderina pennispora 61395 Fungi Fungi 196 1e-45   NTclustered gi|2028311994|ref|XM_040883102.1| 61395 g209073 i0 81.702 84.2766798418972 235 43 93 0 2 236 878 1112 Linderina pennispora uncharacterized protein (DL89DRAFT_11075), mRNA blastn 21322 196 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
22789071 22789071 PRJNA520845_P_NODE_76578_length_424_cov_1.931624_g75079_i0 PRJNA520845 76578 424 1.931624 8.19008576 Fungi 4751 Fungi Fungi 350 1.29e-91   NTclustered gi|666440368|gb|KF848863.1| 78913 g75079 i0 81.604 96.0518867924528 424 76 99 2 2 424 737 315 Rhopalomyces elegans strain NRRL A 10835 beta-tubulin gene, partial cds blastn 40726 350 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Helicocephalidaceae Rhopalomyces Rhopalomyces elegans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;