RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA520845" and tax_phylum = "Tardigrada"

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tax_superkingdom 1

tax_phylum 1

  • Tardigrada · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA520845 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13242765 13242765 PRJNA520845_P_NODE_162371_length_292_cov_1.333333_g160872_i0 PRJNA520845 162371 292 1.333333 3.89333236 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 261 4.13e-65   NTclustered gi|2493463315|ref|XM_055487665.1| 2943436 g160872 i0 89.372 42.1404109589041 207 22 71 0 86 292 1215 1421 PREDICTED: Paramacrobiotus metropolitanus pre-mRNA-processing-splicing factor 8 (LOC129591837), mRNA blastn 12305 261 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
14521344 14521344 PRJNA520845_P_NODE_57112_length_493_cov_3.276190_g55618_i0 PRJNA520845 57112 493 3.27619 16.1516167 Hypsibius dujardini 232323 Tardigrada other_Eukaryota 396 1.93e-105   NTclustered gi|2456588343|gb|ON703165.1| 232323 g55618 i0 97.425 1.00811359026369 233 5 100 1 1 233 2234 2465 Hypsibius dujardini isolate Hduj_4 putative GH32 family protein gene, complete cds blastn 497 396 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Hypsibius Hypsibius dujardini
15793655 15793655 PRJNA520845_P_NODE_243093_length_245_cov_2.563953_g241594_i0 PRJNA520845 243093 245 2.563953 6.28168485 Hypsibius dujardini 232323 Tardigrada other_Eukaryota 355 1.51e-93   NTclustered gi|2456588343|gb|ON703165.1| 232323 g241594 i0 97.585 0.844897959183673 207 5 84 0 1 207 2973 3179 Hypsibius dujardini isolate Hduj_4 putative GH32 family protein gene, complete cds blastn 207 355 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Hypsibius Hypsibius dujardini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;