RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA520845" and tax_phylum = "Placozoa"

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tax_superkingdom 1

tax_phylum 1

  • Placozoa · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA520845 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8141755 8141755 PRJNA520845_P_NODE_156947_length_297_cov_2.098214_g155448_i0 PRJNA520845 156947 297 2.098214 6.23169558 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 121 7.46e-23   NTclustered gi|196005728|ref|XM_002112695.1| 10228 g155448 i0 77.103 2.87542087542088 214 45 71 4 1 212 640 851 Trichoplax adhaerens uncharacterized protein (TRIADDRAFT_26014), partial mRNA blastn 854 121 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
18343401 18343401 PRJNA520845_P_NODE_29555_length_702_cov_6.572337_g28127_i0 PRJNA520845 29555 702 6.572337 46.13780574 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 259 3.85e-64   NTclustered gi|196003261|ref|XM_002111462.1| 10228 g28127 i0 83.158 4.38034188034188 285 46 40 2 122 405 120 403 Trichoplax adhaerens uncharacterized protein (TRIADDRAFT_35819), mRNA blastn 3075 259 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;