RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA520845" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA520845 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15791940 15791940 PRJNA520845_P_NODE_179113_length_278_cov_1.878049_g177614_i0 PRJNA520845 179113 278 1.878049 5.22097622 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 117 8.95e-22   NTclustered gi|294933094|ref|XM_002780549.1| 423536 g177614 i0 79.412 3 170 31 60 4 3 170 427 594 Perkinsus marinus ATCC 50983 40S ribosomal protein S5, putative, mRNA blastn 834 117 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
17068745 17068745 PRJNA520845_P_NODE_263174_length_241_cov_1.833333_g261675_i0 PRJNA520845 263174 241 1.833333 4.41833253 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 115 2.73e-21   NTclustered gi|294925483|ref|XM_002778887.1| 423536 g261675 i0 80.952 13.3070539419087 147 26 61 2 96 241 444 299 Perkinsus marinus ATCC 50983 ribosomal protein S23, putative, mRNA blastn 3207 115 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;