RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA520845" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA520845 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
492196 492196 PRJNA520845_P_NODE_50721_length_525_cov_1.568584_g49229_i0 PRJNA520845 50721 525 1.568584 8.235066 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 76.8 3.06e-9   NTclustered gi|1752389142|ref|XM_030997266.1| 7668 g49229 i0 97.727 7.89333333333333 44 1 8 0 41 84 429 386 PREDICTED: Strongylocentrotus purpuratus receptor-type tyrosine-protein phosphatase O-like (LOC105441908), mRNA blastn 4144 76.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
4316572 4316572 PRJNA520845_P_NODE_193124_length_267_cov_1.587629_g191625_i0 PRJNA520845 193124 267 1.587629 4.23896943 Diadema antillarum 105358 Echinodermata other_Eukaryota 52.8 0.024   NTclustered gi|2919418345|ref|XM_071634807.1| 105358 g191625 i0 100 0.524344569288389 28 0 10 0 235 262 2796 2769 PREDICTED: Diadema antillarum pleckstrin homology domain-containing family G member 5-like (LOC139723562), transcript variant X4, mRNA blastn 140 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
6869850 6869850 PRJNA520845_P_NODE_43826_length_568_cov_2.212121_g42344_i0 PRJNA520845 43826 568 2.212121 12.56484728 Acanthaster planci 133434 Echinodermata other_Eukaryota 87.9 1.54e-12   NTclustered gi|1229184102|ref|XM_022250047.1| 133434 g42344 i0 80.909 0.538732394366197 110 21 19 0 459 568 756 865 PREDICTED: Acanthaster planci homeodomain-interacting protein kinase 2-like (LOC110987363), transcript variant X1, mRNA blastn 306 87.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
9415516 9415516 PRJNA520845_P_NODE_109268_length_356_cov_1.275618_g107769_i0 PRJNA520845 109268 356 1.275618 4.54120008 Patiria miniata 46514 Echinodermata other_Eukaryota 159 1.93e-34   NTclustered gi|1944933246|ref|XM_038222229.1| 46514 g107769 i0 80.189 2.97752808988764 212 42 60 0 145 356 1409 1198 PREDICTED: Patiria miniata 26S proteasome regulatory subunit 7 (LOC119745691), mRNA blastn 1060 159 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
9420999 9420999 PRJNA520845_P_NODE_71728_length_439_cov_1.092896_g70229_i0 PRJNA520845 71728 439 1.092896 4.79781344 Patiria miniata 46514 Echinodermata other_Eukaryota 52.8 0.042   NTclustered gi|1944919046|ref|XM_038216390.1| 46514 g70229 i0 100 0.0637813211845103 28 0 6 0 314 341 2388 2415 PREDICTED: Patiria miniata AT-rich interactive domain-containing protein 4A-like (LOC119740911), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
10695888 10695888 PRJNA520845_P_NODE_40609_length_592_cov_1.460501_g39134_i0 PRJNA520845 40609 592 1.460501 8.64616592 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 178 9.26e-40   NTclustered gi|1752399365|ref|XM_011667624.2| 7668 g39134 i0 83.077 38.1655405405405 195 33 33 0 253 447 389 583 PREDICTED: Strongylocentrotus purpuratus ATP synthase F(0) complex subunit C2, mitochondrial (LOC583818), mRNA blastn 22594 178 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
13244395 13244395 PRJNA520845_P_NODE_223271_length_249_cov_1.312500_g221772_i0 PRJNA520845 223271 249 1.3125 3.268125 Acanthaster planci 133434 Echinodermata other_Eukaryota 141 4.68e-29   NTclustered gi|1229145579|ref|XM_022229421.1| 133434 g221772 i0 80.749 3.6144578313253 187 30 74 6 1 184 720 537 PREDICTED: Acanthaster planci 60S ribosomal protein L7a-like (LOC110976290), mRNA blastn 900 141 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
13864861 13864861 PRJNA520845_P_NODE_102871_length_367_cov_1.044218_g101372_i0 PRJNA520845 102871 367 1.044218 3.83228006 Patiria 35076 Echinodermata other_Eukaryota 213 1.51e-50   NTclustered gi|2581071022|dbj|LC779629.1| 7594 g101372 i0 79.538 21.7384196185286 303 58 82 4 8 308 446 146 Patiria pectinifera mRNA for clathrin heavy chain, complete cds blastn 7978 213 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria pectinifera
14519032 14519032 PRJNA520845_P_NODE_208592_length_255_cov_0.802198_g207093_i0 PRJNA520845 208592 255 0.802198 2.0456049 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 62.1 3.85e-5   NTclustered gi|1752351196|ref|XM_784065.5| 7668 g207093 i0 87.037 0.572549019607843 54 7 21 0 200 253 993 940 PREDICTED: Strongylocentrotus purpuratus caudal type homeobox 1 (LOC584191), mRNA blastn 146 62.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
15796125 15796125 PRJNA520845_P_NODE_97993_length_375_cov_1.993377_g96494_i0 PRJNA520845 97993 375 1.993377 7.47516375 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 178 5.6399999999999996e-40   NTclustered gi|2037976119|ref|XM_041600467.1| 7654 g96494 i0 89.928 14.0826666666667 139 13 37 1 238 375 450 312 PREDICTED: Lytechinus variegatus dynein light chain 2, cytoplasmic-like (LOC121408813), mRNA blastn 5281 178 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
18344838 18344838 PRJNA520845_P_NODE_90395_length_390_cov_7.324921_g88896_i0 PRJNA520845 90395 390 7.324921 28.5671919 Stichopus monotuberculatus 576894 Echinodermata other_Eukaryota 315 4.31e-81   NTclustered gi|656991663|gb|KJ624993.1| 576894 g88896 i0 81.818 57.7564102564103 374 68 96 0 1 374 487 114 Stichopus monotuberculatus calmodulin mRNA, complete cds blastn 22525 315 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Stichopus Stichopus monotuberculatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;