RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA520845" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA520845 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14522018 14522018 PRJNA520845_P_NODE_85232_length_402_cov_1.404255_g83733_i0 PRJNA520845 85232 402 1.404255 5.6451051 Cotonvirus japonicum 3059904 Viruses Viruses 54.7 0.011   NTclustered gi|2500766720|ref|NC_079139.1| 2811091 g83733 i0 100 0.0721393034825871 29 0 7 0 183 211 1070508 1070536 Cotonvirus japonicus DNA, complete genome blastn 29 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Cotonvirus Cotonvirus japonicum
18339072 18339072 PRJNA520845_P_NODE_110555_length_354_cov_1.370107_g109056_i0 PRJNA520845 110555 354 1.370107 4.85017878 Moumouvirus sp. 'maliensis' 2682469 Viruses Viruses 52.8 0.033   NTclustered gi|1780386545|gb|MK978772.1| 2682469 g109056 i0 100 0.0790960451977401 28 0 8 0 317 344 934741 934768 Moumouvirus maliensis, complete genome blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Moumouvirus Moumouvirus sp. 'maliensis'
23443035 23443035 PRJNA520845_P_NODE_229019_length_248_cov_0.971429_g227520_i0 PRJNA520845 229019 248 0.971429 2.40914392 Marseillevirus LCMAC201 2506605 Viruses Viruses 60.2 1.34e-4   NTclustered gi|1588060963|gb|MK500360.1| 2506605 g227520 i0 97.143 12.4838709677419 35 1 14 0 3 37 8524 8490 MAG: Marseillevirus LCMAC201 genomic sequence, sequence blastn 3096 60.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Marseilleviridae   Marseillevirus LCMAC201

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;