RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA520845" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJNA520845 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3041624 3041624 PRJNA520845_P_NODE_228683_length_248_cov_1.320000_g227184_i0 PRJNA520845 228683 248 1.32 3.2736 Thecamonas trahens 529818 Root_unresolved Root_unresolved 180 9.859999999999999e-41   NTclustered gi|923122263|ref|XM_013899148.1| 461836 g227184 i0 80.247 26.2258064516129 243 45 98 3 7 248 289 529 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_12203), partial mRNA blastn 6504 180 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
13247336 13247336 PRJNA520845_P_NODE_97091_length_377_cov_1.444079_g95592_i0 PRJNA520845 97091 377 1.444079 5.44417783 Thecamonas trahens 529818 Root_unresolved Root_unresolved 342 1.8999999999999994e-89   NTclustered gi|923122580|ref|XM_013899306.1| 461836 g95592 i0 83.073 96.5145888594164 384 57 100 5 1 377 1519 1137 Thecamonas trahens ATCC 50062 heat shock protein 90A (AMSG_09389), mRNA blastn 36386 342 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;