contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA515078" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1762141 | 1762141 | PRJNA515078_P_NODE_402_length_1386_cov_64.408451_g135_i3 | PRJNA515078 | 402 | 1386 | 64.408451 | 892.70113086 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 573 | 2.4499999999999996e-158 | NTclustered | gi|166035209|emb|CU349042.1| | 100861 | g135 | i3 | 80.914 | 44.1219336219336 | 744 | 126 | 53 | 13 | 646 | 1381 | 818 | 83 | Aphanomyces euteiches cDNA | blastn | 61153 | 573 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 3038012 | 3038012 | PRJNA515078_P_NODE_8643_length_311_cov_1.624088_g8410_i0 | PRJNA515078 | 8643 | 311 | 1.624088 | 5.05091368 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 239 | 2.08e-58 | NTclustered | gi|166037229|emb|CU357094.1| | 100861 | g8410 | i0 | 80.707 | 39.3022508038585 | 311 | 56 | 99 | 4 | 2 | 310 | 215 | 523 | Aphanomyces euteiches cDNA | blastn | 12223 | 239 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 6864739 | 6864739 | PRJNA515078_P_NODE_9886_length_288_cov_1.593625_g9653_i0 | PRJNA515078 | 9886 | 288 | 1.593625 | 4.58964 | Plasmopara halstedii | 4781 | SAR_Eukaryotes | SAR_Eukaryotes | 63.9 | 1.23e-5 | NTclustered | gi|1378169911|ref|XM_024719330.1| | 4781 | g9653 | i0 | 95 | 1.13194444444444 | 40 | 2 | 24 | 0 | 116 | 155 | 299 | 260 | Plasmopara halstedii uncharacterized protein (PHALS_06101), partial mRNA | blastn | 326 | 63.9 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Plasmopara | Plasmopara halstedii | ||
| 8139870 | 8139870 | PRJNA515078_P_NODE_19927_length_194_cov_2.210191_g19694_i0 | PRJNA515078 | 19927 | 194 | 2.210191 | 4.28777054 | Phytophthora cichorii | 1320215 | SAR_Eukaryotes | SAR_Eukaryotes | 110 | 9.8e-20 | NTclustered | gi|1233049965|gb|KX252011.1| | 1320215 | g19694 | i0 | 81.119 | 8.02577319587629 | 143 | 21 | 72 | 6 | 50 | 189 | 479 | 340 | Phytophthora cichorii isolate 62A8(ex-type) heat shock protein 90 gene, partial cds | blastn | 1557 | 110 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cichorii | ||
| 8139999 | 8139999 | PRJNA515078_P_NODE_527_length_1261_cov_91.323529_g135_i4 | PRJNA515078 | 527 | 1261 | 91.323529 | 1151.58970069 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 573 | 2.2199999999999993e-158 | NTclustered | gi|166035209|emb|CU349042.1| | 100861 | g135 | i4 | 80.914 | 48.4996034892942 | 744 | 126 | 58 | 13 | 521 | 1256 | 818 | 83 | Aphanomyces euteiches cDNA | blastn | 61158 | 573 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 9415022 | 9415022 | PRJNA515078_P_NODE_30828_length_158_cov_0.966942_g30595_i0 | PRJNA515078 | 30828 | 158 | 0.966942 | 1.52776836 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 134 | 4.53e-27 | NTclustered | gi|695379949|ref|XM_009518377.1| | 67593 | g30595 | i0 | 85.714 | 3.77215189873418 | 126 | 18 | 80 | 0 | 2 | 127 | 106 | 231 | Phytophthora sojae hypothetical protein partial mRNA | blastn | 596 | 134 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 15139007 | 15139007 | PRJNA515078_P_NODE_21112_length_189_cov_1.026316_g20879_i0 | PRJNA515078 | 21112 | 189 | 1.026316 | 1.93973724 | Globisporangium | 1448052 | SAR_Eukaryotes | SAR_Eukaryotes | 180 | 7.13e-41 | NTclustered | gi|269812125|gb|GU138663.1| | 2052682 | g20879 | i0 | 86.31 | 88.6825396825397 | 168 | 20 | 89 | 1 | 3 | 170 | 23312 | 23148 | Pythium ultimum culture-collection CBS:398.51 mitochondrion, complete genome | blastn | 16761 | 180 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | Globisporangium ultimum | ||
| 15139029 | 15139029 | PRJNA515078_P_NODE_2812_length_581_cov_5.056985_g2596_i0 | PRJNA515078 | 2812 | 581 | 5.056985 | 29.38108285 | Aphanomyces | 100860 | SAR_Eukaryotes | SAR_Eukaryotes | 470 | 1.34e-127 | NTclustered | gi|698783348|ref|XM_009826416.1| | 112090 | g2596 | i0 | 85.275 | 70.4182444061962 | 455 | 67 | 78 | 0 | 88 | 542 | 67 | 521 | Aphanomyces astaci hypothetical protein mRNA | blastn | 40913 | 472 | 0.995762711864407 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 15139046 | 15139046 | PRJNA515078_P_NODE_3452_length_521_cov_11.522727_g3222_i0 | PRJNA515078 | 3452 | 521 | 11.522727 | 60.03340767 | Saprolegniales | 4763 | SAR_Eukaryotes | SAR_Eukaryotes | 494 | 7.06e-135 | NTclustered | gi|166303|gb|J05116.1|ACKCAL | 4767 | g3222 | i0 | 86.637 | 64.785028790787 | 449 | 57 | 86 | 3 | 1 | 447 | 505 | 952 | A.klebsiana calmodulin gene, complete cds | blastn | 33753 | 496 | 0.995967741935484 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Achlya | Achlya klebsiana | ||
| 17064209 | 17064209 | PRJNA515078_P_NODE_6394_length_371_cov_1.634731_g6161_i0 | PRJNA515078 | 6394 | 371 | 1.634731 | 6.06485201 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 246 | 1.51e-60 | NTclustered | gi|166051160|emb|CU363257.1| | 100861 | g6161 | i0 | 86.547 | 27.9568733153639 | 223 | 30 | 60 | 0 | 52 | 274 | 603 | 825 | Aphanomyces euteiches cDNA | blastn | 10372 | 246 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 17064216 | 17064216 | PRJNA515078_P_NODE_74_length_2273_cov_17.095707_g59_i0 | PRJNA515078 | 74 | 2273 | 17.095707 | 388.58542011 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 1358 | 0 | NTclustered | gi|698782776|ref|XM_009826130.1| | 112090 | g59 | i0 | 78.968 | 59.0488341399032 | 2035 | 397 | 89 | 26 | 230 | 2244 | 2042 | 19 | Aphanomyces astaci hsp82-like protein partial mRNA | blastn | 134218 | 1358 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 22163610 | 22163610 | PRJNA515078_P_NODE_218_length_1674_cov_6.378131_g182_i0 | PRJNA515078 | 218 | 1674 | 6.378131 | 106.76991294 | Achlya ambisexualis | 4768 | SAR_Eukaryotes | SAR_Eukaryotes | 961 | 0 | NTclustered | gi|22086552|gb|AF402101.1| | 4768 | g182 | i0 | 78.944 | 61.7837514934289 | 1458 | 274 | 86 | 32 | 1 | 1440 | 584 | 2026 | Achlya ambisexualis isolate JS855 heat shock protein Hsp90 mRNA, complete cds | blastn | 103426 | 961 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Achlya | Achlya ambisexualis | ||
| 23439397 | 23439397 | PRJNA515078_P_NODE_99_length_2090_cov_16.373113_g59_i1 | PRJNA515078 | 99 | 2090 | 16.373113 | 342.1980617 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 1232 | 0 | NTclustered | gi|698782770|ref|XM_009826127.1| | 112090 | g59 | i1 | 78.885 | 59.7913875598086 | 1866 | 360 | 88 | 28 | 17 | 1861 | 208 | 2060 | Aphanomyces astaci hsp82-like protein mRNA | blastn | 124964 | 1232 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 24062867 | 24062867 | PRJNA515078_P_NODE_14699_length_229_cov_1.619792_g14466_i0 | PRJNA515078 | 14699 | 229 | 1.619792 | 3.70932368 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 58.4 | 4.39e-4 | NTclustered | gi|146220213|gb|EF216565.1| | 299392 | g14466 | i0 | 86.538 | 4.31877729257642 | 52 | 7 | 23 | 0 | 102 | 153 | 510 | 459 | Phytophthora alni subsp. alni strain SCRP2 clone S23-25(P1) SSR marker sequence | blastn | 989 | 58.4 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora x alni |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;