RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA515078" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA515078 · 21 ✖

analysis 1

  • blastn · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1110930 1110930 PRJNA515078_P_NODE_17721_length_207_cov_1.600000_g17488_i0 PRJNA515078 17721 207 1.6 3.312 Pterioida 44598 Mollusca Mollusca 137 4.86e-28   NTclustered gi|1280072559|gb|KY081395.1| 102331 g17488 i0 84.397 32.8502415458937 141 20 68 2 42 181 214 75 Pinna muricata voucher MIEE2015-5PM1 histone H3 (H3) gene, partial cds blastn 6800 137 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pterioida Pinnidae Pinna Pinna muricata
1762073 1762073 PRJNA515078_P_NODE_25862_length_171_cov_1.164179_g25629_i0 PRJNA515078 25862 171 1.164179 1.99074609 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.004   NTclustered gi|2912989933|dbj|AP039594.1| 145626 g25629 i0 100 0.169590643274854 29 0 17 0 129 157 24196307 24196279 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 13, sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
1762159 1762159 PRJNA515078_P_NODE_7062_length_351_cov_1.914013_g6829_i0 PRJNA515078 7062 351 1.914013 6.71818563 Haliotis asinina 109174 Mollusca Mollusca 62.1 5.51e-5   NTclustered gi|2793422566|ref|XM_067824438.1| 109174 g6829 i0 92.857 0.837606837606838 42 3 12 0 177 218 662 703 PREDICTED: Haliotis asinina YLP motif-containing protein 1-like (LOC137293727), transcript variant X1, mRNA blastn 294 62.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
6864673 6864673 PRJNA515078_P_NODE_32186_length_155_cov_0.991525_g31953_i0 PRJNA515078 32186 155 0.991525 1.53686375 Ylistrum balloti 509963 Mollusca Mollusca 58.4 2.74e-4   NTclustered gi|2592088075|ref|XM_060224698.1| 509963 g31953 i0 97.059 5.61290322580645 34 1 22 0 67 100 1657 1624 PREDICTED: Ylistrum balloti B-cell lymphoma/leukemia 11B-like (LOC132560041), mRNA blastn 870 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti
8139951 8139951 PRJNA515078_P_NODE_29467_length_161_cov_1.129032_g29234_i0 PRJNA515078 29467 161 1.129032 1.81774152 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.001   NTclustered gi|2912981848|dbj|AP039587.1| 145626 g29234 i0 97.059 1.28571428571429 34 0 21 1 17 50 81967475 81967443 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 6, sequence blastn 207 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
9414904 9414904 PRJNA515078_P_NODE_12748_length_249_cov_1.127358_g12515_i0 PRJNA515078 12748 249 1.127358 2.80712142 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.006   NTclustered gi|2912994531|dbj|AP039599.1| 145626 g12515 i0 100 0.345381526104418 29 0 12 0 48 76 17667712 17667740 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 18, sequence blastn 86 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
10690507 10690507 PRJNA515078_P_NODE_10329_length_280_cov_4.946502_g10096_i0 PRJNA515078 10329 280 4.946502 13.8502056 Cocculina ovata 2905119 Mollusca Mollusca 148 3.1999999999999993e-31   NTclustered gi|2259974487|gb|OL801254.1| 2905119 g10096 i0 79.358 67.7321428571429 218 39 77 4 25 239 215 1 Cocculina ovata voucher MNHN-IM-2013-42755 histone H3 (histone H3) gene, partial cds blastn 18965 148 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Cocculinidae Cocculina Cocculina ovata
10690509 10690509 PRJNA515078_P_NODE_10529_length_278_cov_1.037344_g10296_i0 PRJNA515078 10529 278 1.037344 2.88381632 Gigantopelta aegis 1735272 Mollusca Mollusca 52.8 0.026   NTclustered gi|2034332913|ref|XM_041508635.1| 1735272 g10296 i0 100 0.402877697841727 28 0 10 0 95 122 4302 4329 PREDICTED: Gigantopelta aegis uncharacterized LOC121379942 (LOC121379942), transcript variant X4, mRNA blastn 112 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
10690707 10690707 PRJNA515078_P_NODE_389_length_1397_cov_1.816176_g331_i0 PRJNA515078 389 1397 1.816176 25.37197872 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.011   NTclustered gi|2912998015|dbj|AP039603.1| 145626 g331 i0 90.909 0.0522548317823908 44 1 3 3 1139 1179 23050339 23050296 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 22, sequence blastn 73 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
10690742 10690742 PRJNA515078_P_NODE_8429_length_315_cov_2.190647_g8196_i0 PRJNA515078 8429 315 2.190647 6.90053805 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.002   NTclustered gi|2912989933|dbj|AP039594.1| 145626 g8196 i0 100 0.0952380952380952 30 0 10 0 44 73 30521417 30521388 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 13, sequence blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
11314129 11314129 PRJNA515078_P_NODE_27649_length_166_cov_0.906977_g27416_i0 PRJNA515078 27649 166 0.906977 1.50558182 Magallana 147004 Mollusca Mollusca 58.4 2.99e-4   NTclustered gi|2751222137|ref|XM_066085686.1| 29159 g27416 i0 97.059 17.5301204819277 34 1 20 0 129 162 2929 2896 PREDICTED: Magallana gigas receptor-type tyrosine-protein phosphatase mu (LOC105339512), mRNA blastn 2910 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
13240646 13240646 PRJNA515078_P_NODE_10251_length_282_cov_1.269388_g10018_i0 PRJNA515078 10251 282 1.269388 3.57967416 Ostrea edulis 37623 Mollusca Mollusca 54.7 0.007   NTclustered gi|2507419220|ref|XM_048884925.2| 37623 g10018 i0 100 0.102836879432624 29 0 10 0 37 65 1504 1476 PREDICTED: Ostrea edulis LHFPL tetraspan subfamily member 3 protein-like (LOC125654836), transcript variant X1, mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Ostrea Ostrea edulis
14515862 14515862 PRJNA515078_P_NODE_4512_length_452_cov_2.725301_g4280_i0 PRJNA515078 4512 452 2.725301 12.31836052 Littorina saxatilis 31220 Mollusca Mollusca 209 2.46e-49   NTclustered gi|2868622224|ref|XM_070342067.1| 31220 g4280 i0 76.943 15.033185840708 386 77 84 11 8 387 555 176 PREDICTED: Littorina saxatilis uncharacterized protein (LOC138969308), mRNA blastn 6795 209 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
15789476 15789476 PRJNA515078_P_NODE_13593_length_240_cov_0.960591_g13360_i0 PRJNA515078 13593 240 0.960591 2.3054184 Ylistrum balloti 509963 Mollusca Mollusca 56.5 0.002   NTclustered gi|2592077857|ref|XM_060219118.1| 509963 g13360 i0 83.607 0.8625 61 8 25 2 181 240 3706 3765 PREDICTED: Ylistrum balloti nuclear pore complex protein Nup214-like (LOC132554807), mRNA blastn 207 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti
18338477 18338477 PRJNA515078_P_NODE_18475_length_202_cov_1.418182_g18242_i0 PRJNA515078 18475 202 1.418182 2.86472764 Bradybaena similaris 145626 Mollusca Mollusca 58.4 3.78e-4   NTclustered gi|2912988862|dbj|AP039593.1| 145626 g18242 i0 100 2.57920792079208 31 0 15 0 90 120 34146994 34147024 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 12, sequence blastn 521 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
19612790 19612790 PRJNA515078_P_NODE_11656_length_261_cov_2.223214_g11423_i0 PRJNA515078 11656 261 2.223214 5.80258854 Crassostrea virginica 6565 Mollusca Mollusca 56.5 0.002   NTclustered gi|1242838651|ref|XM_022444776.1| 6565 g11423 i0 92.308 1.54022988505747 39 3 15 0 64 102 1402 1440 PREDICTED: Crassostrea virginica uncharacterized LOC111108727 (LOC111108727), mRNA blastn 402 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
19613002 19613002 PRJNA515078_P_NODE_7996_length_325_cov_2.843750_g7763_i0 PRJNA515078 7996 325 2.84375 9.2421875 Mercenaria mercenaria 6596 Mollusca Mollusca 213 1.32e-50   NTclustered gi|2442047263|ref|XM_053539077.1| 6596 g7763 i0 83.122 20.2953846153846 237 36 72 3 6 240 1646 1880 PREDICTED: Mercenaria mercenaria transitional endoplasmic reticulum ATPase (LOC123524253), transcript variant X2, mRNA blastn 6596 213 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
20888919 20888919 PRJNA515078_P_NODE_22417_length_183_cov_1.602740_g22184_i0 PRJNA515078 22417 183 1.60274 2.9330142 Saccostrea echinata 191078 Mollusca Mollusca 65.8 2e-6   NTclustered gi|2628406746|ref|XM_061315423.1| 191078 g22184 i0 97.368 1.2568306010929 38 1 21 0 5 42 805 768 PREDICTED: Saccostrea echinata ras-related GTP-binding protein A (LOC133180953), mRNA blastn 230 65.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea echinata
22163560 22163560 PRJNA515078_P_NODE_13858_length_237_cov_1.660000_g13625_i0 PRJNA515078 13858 237 1.66 3.9342 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.006   NTclustered gi|2913001816|dbj|AP039609.1| 145626 g13625 i0 96.875 0.135021097046413 32 1 14 0 67 98 5761723 5761754 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 28, sequence blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
24062883 24062883 PRJNA515078_P_NODE_23739_length_178_cov_1.382979_g23506_i0 PRJNA515078 23739 178 1.382979 2.46170262 Opisthokonta 33154 Mollusca Mollusca 54.7 0.004   NTclustered gi|2502195674|ref|XM_013210723.2| 6526 g23506 i0 96.875 1.61797752808989 32 1 18 0 90 121 348 379 PREDICTED: Biomphalaria glabrata anaphase-promoting complex subunit 15B-like (LOC106054728), mRNA blastn 288 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
25337353 25337353 PRJNA515078_P_NODE_26020_length_170_cov_2.052632_g25787_i0 PRJNA515078 26020 170 2.052632 3.4894744 Metazoa 33208 Mollusca Mollusca 54.7 0.004   NTclustered gi|2245699186|ref|XM_046504878.2| 6454 g25787 i0 96.875 0.923529411764706 32 1 19 0 2 33 2218 2187 PREDICTED: Haliotis rufescens arginine/serine-rich protein PNISR-like (LOC124138289), transcript variant X2, mRNA blastn 157 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;