RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA515078" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA515078 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1762172 1762172 PRJNA515078_P_NODE_9302_length_299_cov_1.412214_g9069_i0 PRJNA515078 9302 299 1.412214 4.22251986 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 54.7 0.008   NTclustered gi|2124406926|ref|XM_044688018.1| 51637 g9069 i0 96.875 0.107023411371237 32 1 11 0 53 84 1199 1168 Naegleria lovaniensis uncharacterized protein (C9374_012270), partial mRNA blastn 32 54.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
3037872 3037872 PRJNA515078_P_NODE_19743_length_195_cov_1.993671_g19510_i0 PRJNA515078 19743 195 1.993671 3.88765845 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 100 5.93e-17   NTclustered gi|2119427480|ref|XM_044689114.1| 51637 g19510 i0 79.31 1.47692307692308 145 29 74 1 44 187 512 656 Naegleria lovaniensis uncharacterized protein (C9374_001326), partial mRNA blastn 288 100 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
10690605 10690605 PRJNA515078_P_NODE_2129_length_667_cov_1.595238_g1931_i0 PRJNA515078 2129 667 1.595238 10.64023746 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 556 1.1499999999999999e-153   NTclustered gi|290996126|ref|XM_002680588.1| 5762 g1931 i0 83.443 88.5412293853073 610 89 91 10 1 604 631 28 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55154), mRNA blastn 59057 556 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14515820 14515820 PRJNA515078_P_NODE_29752_length_160_cov_1.268293_g29519_i0 PRJNA515078 29752 160 1.268293 2.0292688 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 267 4.35e-67   NTclustered gi|290973721|ref|XM_002669550.1| 5762 g29519 i0 96.855 57.9375 159 5 99 0 2 160 180 22 Naegleria gruberi histone H3 (NAEGRDRAFT_83339), mRNA blastn 9270 267 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18962557 18962557 PRJNA515078_P_NODE_13615_length_239_cov_2.554455_g13382_i0 PRJNA515078 13615 239 2.554455 6.10514745 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 217 7.2e-52   NTclustered gi|2119422153|ref|XM_044711294.1| 5763 g13382 i0 83.264 230.790794979079 239 36 99 4 3 239 526 762 Naegleria fowleri uncharacterized protein (FDP41_007538), partial mRNA blastn 55159 217 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
22163730 22163730 PRJNA515078_P_NODE_4898_length_430_cov_55.096692_g4665_i0 PRJNA515078 4898 430 55.096692 236.9157756 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 187 1.0899999999999997e-42   NTclustered gi|2124390888|ref|XM_044710315.1| 5763 g4665 i0 86.905 3.74418604651163 168 20 39 2 111 277 61 227 Naegleria fowleri uncharacterized protein (FDP41_006657), partial mRNA blastn 1610 187 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
23439387 23439387 PRJNA515078_P_NODE_8659_length_310_cov_35.293040_g8426_i0 PRJNA515078 8659 310 35.29304 109.408424 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 285 2.62e-72   NTclustered gi|2031940867|emb|OD957772.1| 5763 g8426 i0 85.053 72.0193548387097 281 40 90 2 1 280 53060 52781 Naegleria fowleri Karachi_NF001 strain blastn 22326 285 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;