RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA515078" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA515078 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1762139 1762139 PRJNA515078_P_NODE_3942_length_487_cov_10.377778_g3710_i0 PRJNA515078 3942 487 10.377778 50.53977886 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 398 5.2899999999999975e-106   NTclustered gi|2519013169|ref|XM_057457998.1| 13093 g3710 i0 81.557 158.560574948665 488 84 99 6 1 485 284 768 PREDICTED: Hydractinia symbiolongicarpus polyubiquitin-C (LOC130655264), mRNA blastn 77219 398 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
3038008 3038008 PRJNA515078_P_NODE_8263_length_319_cov_1.517730_g8030_i0 PRJNA515078 8263 319 1.51773 4.8415587 Anemonia sulcata 6108 Cnidaria other_Eukaryota 65.8 3.84e-6   NTclustered gi|2917940687|emb|OZ237555.1| 6108 g8030 i0 93.182 2.70532915360502 44 3 14 0 261 304 20600740 20600697 Anemonia sulcata genome assembly, chromosome: 1 blastn 863 65.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
6864653 6864653 PRJNA515078_P_NODE_30366_length_159_cov_0.959016_g30133_i0 PRJNA515078 30366 159 0.959016 1.52483544 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 128 2.13e-25   NTclustered gi|2782846292|ref|XM_067056275.1| 252671 g30133 i0 87.387 18.1194968553459 111 14 70 0 23 133 930 1040 PREDICTED: Clytia hemisphaerica 26S proteasome regulatory subunit 8 (LOC136799556), mRNA blastn 2881 128 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
10690526 10690526 PRJNA515078_P_NODE_12049_length_256_cov_13.721461_g11816_i0 PRJNA515078 12049 256 13.721461 35.12694016 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 211 3.63e-50   NTclustered gi|2519013169|ref|XM_057457998.1| 13093 g11816 i0 82.645 71.75390625 242 38 94 4 3 242 540 301 PREDICTED: Hydractinia symbiolongicarpus polyubiquitin-C (LOC130655264), mRNA blastn 18369 211 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
11965485 11965485 PRJNA515078_P_NODE_10610_length_276_cov_2.602510_g10377_i0 PRJNA515078 10610 276 2.60251 7.1829276 Calycella syringa 314529 Cnidaria other_Eukaryota 122 1.9099999999999998e-23   NTclustered gi|256674468|gb|FJ550372.1| 314529 g10377 i0 86.087 36.1992753623188 115 14 41 2 152 265 1567 1454 Calycella syringa 28S ribosomal RNA gene, partial sequence blastn 9991 122 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Campanulariidae Calycella Calycella syringa
13864753 13864753 PRJNA515078_P_NODE_29571_length_161_cov_0.862903_g29338_i0 PRJNA515078 29571 161 0.862903 1.38927383 Metazoa 33208 Cnidaria other_Eukaryota 58.4 2.87e-4   NTclustered gi|2917940696|emb|OZ237557.1| 6108 g29338 i0 100 10.9192546583851 31 0 19 0 7 37 21150140 21150110 Anemonia sulcata genome assembly, chromosome: 3 blastn 1758 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
19612981 19612981 PRJNA515078_P_NODE_5116_length_421_cov_1.421875_g4883_i0 PRJNA515078 5116 421 1.421875 5.98609375 Anemonia sulcata 6108 Cnidaria other_Eukaryota 56.5 0.003   NTclustered gi|2917940731|emb|OZ237564.1| 6108 g4883 i0 100 3.77672209026128 30 0 7 0 149 178 995552 995523 Anemonia sulcata genome assembly, chromosome: 10 blastn 1590 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
22788012 22788012 PRJNA515078_P_NODE_29278_length_161_cov_1.572581_g29045_i0 PRJNA515078 29278 161 1.572581 2.53185541 Metazoa 33208 Cnidaria other_Eukaryota 148 1.6599999999999998e-31   NTclustered gi|2518959458|ref|XM_057433663.1| 13093 g29045 i0 86.567 85.9316770186335 134 18 83 0 24 157 1184 1317 PREDICTED: Hydractinia symbiolongicarpus endoplasmic reticulum chaperone BiP-like (LOC130612358), mRNA blastn 13835 148 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;