RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA515078" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 5 ✖

bioproject 1

  • PRJNA515078 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1762001 1762001 PRJNA515078_P_NODE_15682_length_221_cov_1.369565_g15449_i0 PRJNA515078 15682 221 1.369565 3.02673865 Thecamonas trahens 529818 Root_unresolved Root_unresolved 195 3.08e-45   NTclustered gi|761380055|ref|NC_026452.1| 529818 g15449 i0 82.949 101.407239819005 217 35 98 2 5 220 1532 1747 Thecamonas trahens strain ATCC 50062 mitochondrion, complete genome blastn 22411 195 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
5590563 5590563 PRJNA515078_P_NODE_11385_length_265_cov_2.372807_g11152_i0 PRJNA515078 11385 265 2.372807 6.28793855 Thecamonas trahens 529818 Root_unresolved Root_unresolved 172 1.78e-38   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g11152 i0 81.223 40.1471698113208 229 29 83 10 23 241 422 198 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 10639 172 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
10690739 10690739 PRJNA515078_P_NODE_8109_length_322_cov_2.354386_g7876_i0 PRJNA515078 8109 322 2.354386 7.58112292 Thecamonas trahens 529818 Root_unresolved Root_unresolved 141 6.27e-29   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g7876 i0 77.734 9.93167701863354 256 40 78 9 3 254 602 844 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 3198 141 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
10690755 10690755 PRJNA515078_P_NODE_9609_length_293_cov_1.523438_g9376_i0 PRJNA515078 9609 293 1.523438 4.46367334 Thecamonas trahens 529818 Root_unresolved Root_unresolved 375 1.4199999999999998e-99   NTclustered gi|923122580|ref|XM_013899306.1| 461836 g9376 i0 89.761 101.529010238908 293 30 100 0 1 293 979 1271 Thecamonas trahens ATCC 50062 heat shock protein 90A (AMSG_09389), mRNA blastn 29748 375 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
24712979 24712979 PRJNA515078_P_NODE_31680_length_156_cov_1.159664_g31447_i0 PRJNA515078 31680 156 1.159664 1.80907584 Thecamonas trahens 529818 Root_unresolved Root_unresolved 141 2.67e-29   NTclustered gi|923133140|ref|XM_013904582.1| 461836 g31447 i0 89.286 73.1538461538462 112 12 72 0 1 112 112 1 Thecamonas trahens ATCC 50062 Ras-like protein rasG (AMSG_03185), partial mRNA blastn 11412 141 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;