RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA513467" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA513467 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11965458 11965458 PRJNA513467_S_NODE_6570_length_164_cov_1.535433_g6547_i0 PRJNA513467 6570 164 1.535433 2.51811012 Gilbertella persicaria 101096 Fungi Fungi 255 9.72e-64   NTclustered gi|2323746072|ref|XM_051578726.1| 101096 g6547 i0 95.597 55.5121951219512 159 7 97 0 3 161 412 254 Gilbertella persicaria 60S ribosomal protein L10a-2 (B0P05DRAFT_546117), mRNA blastn 9104 255 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria
13240553 13240553 PRJNA513467_S_NODE_1871_length_259_cov_2.022523_g1848_i0 PRJNA513467 1871 259 2.022523 5.23833457 Mucor velutinosus 708070 Fungi Fungi 390 4.3999999999999996e-104   NTclustered gi|2724903151|ref|XM_064828988.1| 708070 g1848 i0 93.822 14.046332046332 259 16 100 0 1 259 118 376 Mucor velutinosus uncharacterized protein (ATC70_009760), partial mRNA blastn 3638 390 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;