RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA513467" and tax_kingdom = "Heunggongvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Heunggongvirae · 3 ✖

bioproject 1

  • PRJNA513467 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
486637 486637 PRJNA513467_S_NODE_3741_length_200_cov_2.024540_g3718_i0 PRJNA513467 3741 200 2.02454 4.04908 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.017   NTclustered gi|2054548793|tpg|BK048005.1| 2832643 g3718 i0 100 0.14 28 0 14 0 171 198 12018 12045 MAG TPA_asm: Caudoviricetes sp. isolate ct5Sd10, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
18338389 18338389 PRJNA513467_S_NODE_7935_length_153_cov_1.793103_g7912_i0 PRJNA513467 7935 153 1.793103 2.74344759 Caudoviricetes sp. 2832643 Viruses Viruses 283 4.0799999999999995e-72   NTclustered gi|2906147942|gb|PQ646354.1| 2832643 g7912 i0 100 1 153 0 100 0 1 153 19584 19432 MAG: Caudoviricetes sp. isolate k127_298828 genomic sequence blastn 153 283 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
20237339 20237339 PRJNA513467_S_NODE_3836_length_198_cov_44.192547_g3813_i0 PRJNA513467 3836 198 44.192547 87.50124306 root 1 Root_unresolved Root_unresolved 316 5.51e-82   NTclustered gi|671698184|gb|KM192300.1| 10359 g3813 i0 95.455 102 198 9 100 0 1 198 39032 39229 Human herpesvirus 5 strain Merlin isolate RCMV1528, complete genome blastn 20196 316 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus humanbeta5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;