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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA513467" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 11 ✖

bioproject 1

  • PRJNA513467 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6214386 6214386 PRJNA513467_S_NODE_8105_length_152_cov_1.539130_g8082_i0 PRJNA513467 8105 152 1.53913 2.3394776 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 276 6.770000000000001e-70   NTclustered gi|114329902|ref|NC_008339.1| 5907 g8082 i0 99.346 102.934210526316 153 0 100 1 1 152 838 990 Tetrahymena pigmentosa mitochondrion, complete genome blastn 15646 276 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa
9414840 9414840 PRJNA513467_S_NODE_4588_length_186_cov_1.926174_g4565_i0 PRJNA513467 4588 186 1.926174 3.58268364 Lamtostyla gui 2678605 SAR_Eukaryotes SAR_Eukaryotes 241 3.16e-59   NTclustered gi|1778223994|gb|MN733822.1| 2678605 g4565 i0 89.947 14.0806451612903 189 15 100 4 1 186 4190 4377 Lamtostyla gui isolate LWY2015111409 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2619 241 1 Eukaryota Sar   Ciliophora Spirotrichea Stichotrichida Amphisiellidae Lamtostyla Lamtostyla gui
11314076 11314076 PRJNA513467_S_NODE_4169_length_192_cov_31.619355_g4146_i0 PRJNA513467 4169 192 31.619355 60.7091616 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 329 6.82e-86   NTclustered gi|10782|emb|X54004.1| 5908 g4146 i0 97.423 87.875 194 3 100 2 1 192 3153 2960 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 16872 329 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
13864675 13864675 PRJNA513467_S_NODE_3651_length_202_cov_1.351515_g3628_i0 PRJNA513467 3651 202 1.351515 2.7300603 Skeletonema 2842 SAR_Eukaryotes SAR_Eukaryotes 135 1.7000000000000002e-27   NTclustered gi|2739942912|dbj|LC814772.1| 267566 g3628 i0 87.826 56.0841584158416 115 14 57 0 1 115 887 1001 Skeletonema dohrnii SD_MZ01 mitochondrial DNA, complete genome blastn 11329 135 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema dohrnii
15789388 15789388 PRJNA513467_S_NODE_413_length_478_cov_4.605442_g390_i0 PRJNA513467 413 478 4.605442 22.01401276 Cercozoa sp. YPF501 552662 SAR_Eukaryotes SAR_Eukaryotes 303 1.16e-77   NTclustered gi|220983376|dbj|AB453012.1| 552662 g390 i0 78.85 81.9121338912134 487 76 100 17 1 478 2059 1591 Cercozoa sp. YPF501 gene for nuclear large subunit ribosomal RNA, partial sequence blastn 39154 303 1 Eukaryota Sar   Cercozoa         Cercozoa sp. YPF501
15789417 15789417 PRJNA513467_S_NODE_6013_length_169_cov_1.772727_g5990_i0 PRJNA513467 6013 169 1.772727 2.99590863 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 95.3 2.31e-15   NTclustered gi|673019759|ref|XM_008865619.1| 157072 g5990 i0 80.159 10.3550295857988 126 25 75 0 8 133 252 127 Aphanomyces invadans 40S ribosomal protein S23 mRNA blastn 1750 95.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
17688770 17688770 PRJNA513467_S_NODE_3574_length_203_cov_8.150602_g3551_i0 PRJNA513467 3574 203 8.150602 16.54572206 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 353 4.33e-93   NTclustered gi|2624665746|gb|OR878271.1| 210825 g3551 i0 100 91.5566502463054 191 0 94 0 1 191 666 856 Glaucoma scintillans isolate LLH20220320 large subunit ribosomal RNA gene, partial sequence blastn 18586 353 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Glaucomidae Glaucoma Glaucoma scintillans
19612697 19612697 PRJNA513467_S_NODE_2596_length_228_cov_2.120419_g2573_i0 PRJNA513467 2596 228 2.120419 4.83455532 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 204 5.2999999999999994e-48   NTclustered gi|238617605|gb|FJ973380.1| 45107 g2573 i0 83.043 33.75 230 34 100 5 1 228 1869 1643 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 7695 204 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
19612770 19612770 PRJNA513467_S_NODE_8216_length_151_cov_3.745614_g8193_i0 PRJNA513467 8216 151 3.7456140000000002 5.65587714 uncultured diatom 137771 SAR_Eukaryotes SAR_Eukaryotes 255 8.75e-64   NTclustered gi|831437111|gb|KR089971.1| 137771 g8193 i0 97.931 99.0397350993377 145 3 96 0 1 145 21 165 Uncultured diatom clone 108838_JV_L59_13_D4 18S ribosomal RNA gene, partial sequence blastn 14955 255 1 Eukaryota Sar   Bacillariophyta         uncultured diatom
20237337 20237337 PRJNA513467_S_NODE_3036_length_216_cov_1.374302_g3013_i0 PRJNA513467 3036 216 1.374302 2.96849232 Poterioochromonas 88166 SAR_Eukaryotes SAR_Eukaryotes 394 2.75e-105   NTclustered gi|323690576|gb|GU935635.1| 88167 g3013 i0 99.537 100.023148148148 216 1 100 0 1 216 1771 1556 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 21605 394 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
20888825 20888825 PRJNA513467_S_NODE_997_length_332_cov_4.891525_g974_i0 PRJNA513467 997 332 4.891525 16.239863 Symbiodinium kawagutii 104179 SAR_Eukaryotes SAR_Eukaryotes 106 2.37e-18   NTclustered gi|512780665|gb|KC937287.1| 104179 g974 i0 84.762 1.54819277108434 105 16 32 0 228 332 276 172 Symbiodinium kawagutii strain CCMP2468 clone SymkaSLLR3-216, partial sequence blastn 514 106 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium kawagutii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;