RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA512103" and tax_phylum = "Negarnaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA512103 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4312778 4312778 PRJNA512103_P_NODE_22124_length_202_cov_0.810458_g21712_i0 PRJNA512103 22124 202 0.810458 1.63712516 Artemvirus bsafialis 3426459 Viruses Viruses 337 4.34e-88   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g21712 i0 99.459 13.7376237623762 185 1 92 0 10 194 4867 5051 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 2775 337 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
5589482 5589482 PRJNA512103_P_NODE_1725_length_1362_cov_6.859101_g1532_i0 PRJNA512103 1725 1362 6.859101 93.42095562 brine shrimp yue-like virus 7 2900459 Viruses Viruses 2486 0   NTclustered gi|2209095278|gb|OL472843.1| 2900459 g1532 i0 100 4.9632892804699 1346 0 99 0 10 1355 21 1366 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 2 hypothetical protein gene, complete cds blastn 6760 2486 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
5589821 5589821 PRJNA512103_P_NODE_2605_length_1059_cov_2.529703_g2343_i0 PRJNA512103 2605 1059 2.529703 26.78955477 brine shrimp yue-like virus 7 2900459 Viruses Viruses 1929 0   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g2343 i0 99.81 4.95750708215297 1050 2 99 0 1 1050 1077 28 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 5250 1929 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
5589902 5589902 PRJNA512103_P_NODE_28205_length_176_cov_1.803150_g27793_i0 PRJNA512103 28205 176 1.80315 3.173544 brine shrimp yue-like virus 7 2900459 Viruses Viruses 296 6.21e-76   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g27793 i0 99.387 4.63068181818182 163 1 93 0 5 167 1214 1052 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 815 296 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
8138792 8138792 PRJNA512103_P_NODE_17947_length_231_cov_1.307692_g17535_i0 PRJNA512103 17947 231 1.307692 3.02076852 brine shrimp yue-like virus 7 2900459 Viruses Viruses 387 4.98e-103   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g17535 i0 99.528 4.58874458874459 212 1 92 0 12 223 1420 1631 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1060 387 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
10690171 10690171 PRJNA512103_P_NODE_49_length_5940_cov_3.186556_g40_i0 PRJNA512103 49 5940 3.186556 189.2814264 brine shrimp yue-like virus 7 2900459 Viruses Viruses 7236 0   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g40 i0 99.373 4.98316498316498 3987 18 99 3 1961 5940 5973 1987 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 29600 7236 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
14515356 14515356 PRJNA512103_P_NODE_52_length_5833_cov_3.206086_g40_i1 PRJNA512103 52 5833 3.206086 187.01099638 brine shrimp yue-like virus 7 2900459 Viruses Viruses 7236 0   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g40 i1 99.373 4.98885650608606 3987 18 99 3 1 3980 1987 5973 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 29100 7236 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
15788778 15788778 PRJNA512103_P_NODE_27293_length_179_cov_1.738462_g26881_i0 PRJNA512103 27293 179 1.738462 3.11184698 brine shrimp yue-like virus 7 2900459 Viruses Viruses 315 1.75e-81   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g26881 i0 100 4.74860335195531 170 0 95 0 1 170 1893 1724 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 850 315 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;