RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA512103" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA512103 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11964973 11964973 PRJNA512103_P_NODE_31730_length_167_cov_0.881356_g31318_i0 PRJNA512103 31730 167 0.881356 1.47186452 Rhizopus microsporus 58291 Fungi Fungi 62.1 2.33e-5   NTclustered gi|1331204921|ref|XM_023609497.1| 1340429 g31318 i0 92.857 3.44311377245509 42 3 25 0 80 121 858 817 Rhizopus microsporus ATCC 52813 signal recognition particle binding protein (RHIMIDRAFT_241022), partial mRNA blastn 575 62.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
15788787 15788787 PRJNA512103_P_NODE_27473_length_179_cov_1.061538_g27061_i0 PRJNA512103 27473 179 1.061538 1.90015302 Halteromyces radiatus 101107 Fungi Fungi 150 5.23e-32   NTclustered gi|2323756620|ref|XM_051542456.1| 101107 g27061 i0 86.331 76.7150837988827 139 17 77 2 1 138 540 677 Halteromyces radiatus 70 kDa heat shock protein 3 (BX664DRAFT_302997), mRNA blastn 13732 150 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;