contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA512103" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 486194 | 486194 | PRJNA512103_P_NODE_31741_length_167_cov_0.881356_g31329_i0 | PRJNA512103 | 31741 | 167 | 0.881356 | 1.47186452 | Micrococcus luteus | 1270 | Bacteria | Bacteria | 278 | 2.12e-70 | NTclustered | gi|2276865348|gb|CP101528.1| | 1270 | g31329 | i0 | 100 | 18.502994011976 | 150 | 0 | 90 | 0 | 10 | 159 | 902916 | 903065 | Micrococcus luteus strain ML chromosome, complete genome | blastn | 3090 | 278 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 486231 | 486231 | PRJNA512103_P_NODE_32941_length_165_cov_0.896552_g32529_i0 | PRJNA512103 | 32941 | 165 | 0.896552 | 1.4793108 | Gordonia sp. 135 | 2676309 | Bacteria | Bacteria | 239 | 9.87e-59 | NTclustered | gi|1779023796|gb|CP046257.1| | 2676309 | g32529 | i0 | 98.529 | 94.0242424242424 | 136 | 0 | 82 | 2 | 21 | 156 | 4580504 | 4580637 | Gordonia sp. 135 chromosome, complete genome | blastn | 15514 | 239 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Gordoniaceae | Gordonia | Gordonia sp. 135 | ||
| 1761069 | 1761069 | PRJNA512103_P_NODE_21102_length_208_cov_0.867925_g20690_i0 | PRJNA512103 | 21102 | 208 | 0.867925 | 1.8052840000000001 | Gordonia sp. MP11Mi | 3022769 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|2592691643|gb|CP128986.1| | 3022769 | g20690 | i0 | 96.875 | 0.153846153846154 | 32 | 1 | 15 | 0 | 123 | 154 | 1291122 | 1291153 | Gordonia sp. MP11Mi chromosome, complete genome | blastn | 32 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Gordoniaceae | Gordonia | Gordonia sp. MP11Mi | ||
| 5589608 | 5589608 | PRJNA512103_P_NODE_20545_length_211_cov_1.024691_g20133_i0 | PRJNA512103 | 20545 | 211 | 1.024691 | 2.16209801 | Brevibacterium sp. BRM-1 | 2999062 | Bacteria | Bacteria | 294 | 2.79e-75 | NTclustered | gi|2407432046|gb|CP113788.1| | 2999062 | g20133 | i0 | 94.301 | 222.265402843602 | 193 | 9 | 91 | 2 | 10 | 202 | 1090972 | 1090782 | Brevibacterium sp. BRM-1 chromosome, complete genome | blastn | 46898 | 294 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Brevibacteriaceae | Brevibacterium | Brevibacterium sp. BRM-1 | ||
| 7488944 | 7488944 | PRJNA512103_P_NODE_32926_length_165_cov_0.896552_g32514_i0 | PRJNA512103 | 32926 | 165 | 0.896552 | 1.4793108 | Actinomycetota | 201174 | Bacteria | Bacteria | 110 | 8.07e-20 | NTclustered | gi|1865334670|gb|CP058322.1| | 47853 | g32514 | i0 | 80.822 | 72.230303030303 | 146 | 22 | 87 | 5 | 10 | 152 | 3450549 | 3450691 | Micromonospora carbonacea strain aurantiaca chromosome, complete genome | blastn | 11918 | 110 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Micromonospora | Micromonospora carbonacea | ||
| 8763856 | 8763856 | PRJNA512103_P_NODE_21907_length_203_cov_0.954545_g21495_i0 | PRJNA512103 | 21907 | 203 | 0.954545 | 1.93772635 | Corynebacterium | 1716 | Bacteria | Bacteria | 342 | 9.369999999999999e-90 | NTclustered | gi|1954924873|gb|CP067012.1| | 1979527 | g21495 | i0 | 100 | 345.07881773399 | 185 | 0 | 91 | 0 | 10 | 194 | 597848 | 598032 | Corynebacterium kefirresidentii strain FDAARGOS_1055 chromosome, complete genome | blastn | 70051 | 342 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium kefirresidentii | ||
| 10039392 | 10039392 | PRJNA512103_P_NODE_18108_length_230_cov_1.016575_g17696_i0 | PRJNA512103 | 18108 | 230 | 1.016575 | 2.3381225 | Micrococcus | 1269 | Bacteria | Bacteria | 387 | 4.96e-103 | NTclustered | gi|1949953231|gb|CP066288.1| | 1270 | g17696 | i0 | 99.07 | 263.108695652174 | 215 | 2 | 93 | 0 | 16 | 230 | 2260514 | 2260728 | Micrococcus luteus strain FDAARGOS_1034 chromosome | blastn | 60515 | 387 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 11964511 | 11964511 | PRJNA512103_P_NODE_19530_length_218_cov_1.224852_g19118_i0 | PRJNA512103 | 19530 | 218 | 1.224852 | 2.67017736 | Actinokineospora sp. UTMC 2448 | 2268449 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|2290867056|gb|CP031087.1| | 2268449 | g19118 | i0 | 100 | 0.334862385321101 | 29 | 0 | 13 | 0 | 78 | 106 | 5593237 | 5593209 | Actinokineospora sp. UTMC 2448 chromosome, complete genome | blastn | 73 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Actinokineospora | Actinokineospora sp. UTMC 2448 | ||
| 11964646 | 11964646 | PRJNA512103_P_NODE_23030_length_197_cov_1.114865_g22618_i0 | PRJNA512103 | 23030 | 197 | 1.114865 | 2.19628405 | Rothia mucilaginosa | 43675 | Bacteria | Bacteria | 344 | 2.51e-90 | NTclustered | gi|2894495941|gb|CP178327.1| | 43675 | g22618 | i0 | 99.471 | 295.543147208122 | 189 | 1 | 96 | 0 | 1 | 189 | 1093748 | 1093560 | Rothia mucilaginosa strain SOSUI004 chromosome, complete genome | blastn | 58222 | 344 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia mucilaginosa | ||
| 12589816 | 12589816 | PRJNA512103_P_NODE_8330_length_438_cov_2.128535_g7919_i0 | PRJNA512103 | 8330 | 438 | 2.128535 | 9.3229833 | Brachybacterium | 43668 | Bacteria | Bacteria | 573 | 7.309999999999997e-159 | NTclustered | gi|1654137461|gb|CP027295.1| | 2571029 | g7919 | i0 | 90.455 | 247.869863013699 | 440 | 35 | 99 | 6 | 1 | 436 | 5712 | 6148 | Brachybacterium sp. SGAir0954 chromosome, complete genome | blastn | 108567 | 573 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Dermabacteraceae | Brachybacterium | Brachybacterium sp. SGAir0954 | ||
| 13864638 | 13864638 | PRJNA512103_P_NODE_29391_length_172_cov_1.617886_g28979_i0 | PRJNA512103 | 29391 | 172 | 1.617886 | 2.78276392 | Rhodococcus | 1827 | Bacteria | Bacteria | 285 | 1.31e-72 | NTclustered | gi|2660106423|gb|CP138905.1| | 1831 | g28979 | i0 | 100 | 45.3372093023256 | 154 | 0 | 90 | 0 | 10 | 163 | 2878167 | 2878320 | MAG: Rhodococcus sp. (in: high G+C Gram-positive bacteria) isolate 1088c chromosome | blastn | 7798 | 285 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Rhodococcus | Rhodococcus sp. (in: high G+C Gram-positive bacteria) | ||
| 15138922 | 15138922 | PRJNA512103_P_NODE_9452_length_394_cov_1.530435_g9040_i0 | PRJNA512103 | 9452 | 394 | 1.530435 | 6.0299139 | Micrococcus | 1269 | Bacteria | Bacteria | 728 | 0 | NTclustered | gi|2276865348|gb|CP101528.1| | 1270 | g9040 | i0 | 100 | 239.616751269036 | 394 | 0 | 100 | 0 | 1 | 394 | 403269 | 402876 | Micrococcus luteus strain ML chromosome, complete genome | blastn | 94409 | 728 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 15788165 | 15788165 | PRJNA512103_P_NODE_11493_length_335_cov_1.234266_g11081_i0 | PRJNA512103 | 11493 | 335 | 1.234266 | 4.1347911 | Corynebacterium anserum | 2684406 | Bacteria | Bacteria | 383 | 9.86e-102 | NTclustered | gi|1894829214|gb|CP046883.1| | 2684406 | g11081 | i0 | 93.462 | 308.597014925373 | 260 | 13 | 77 | 2 | 77 | 333 | 115053 | 115311 | Corynebacterium anserum strain 23H37-10 chromosome, complete genome | blastn | 103380 | 383 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium anserum | ||
| 20237286 | 20237286 | PRJNA512103_P_NODE_16736_length_243_cov_0.958763_g16324_i0 | PRJNA512103 | 16736 | 243 | 0.958763 | 2.32979409 | Micrococcus | 1269 | Bacteria | Bacteria | 431 | 2.4099999999999995e-116 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g16324 | i0 | 99.163 | 356.958847736626 | 239 | 2 | 98 | 0 | 5 | 243 | 346129 | 346367 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 86741 | 431 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 20888112 | 20888112 | PRJNA512103_P_NODE_26197_length_184_cov_0.903704_g25785_i0 | PRJNA512103 | 26197 | 184 | 0.903704 | 1.66281536 | uncultured Actinomycetota bacterium | 3039803 | Bacteria | Bacteria | 315 | 1.81e-81 | NTclustered | gi|2874253711|emb|OY969553.1| | 3039803 | g25785 | i0 | 98.864 | 512.934782608696 | 176 | 2 | 96 | 0 | 9 | 184 | 463098 | 463273 | MAG: uncultured Actinomycetota bacterium isolate MFD04212.bin.1.1 genome assembly, chromosome: 1 | blastn | 94380 | 315 | 1 | Bacteria | Bacillati | Actinomycetota | uncultured Actinomycetota bacterium | ||||||
| 22787894 | 22787894 | PRJNA512103_P_NODE_15238_length_262_cov_1.164319_g14826_i0 | PRJNA512103 | 15238 | 262 | 1.164319 | 3.05051578 | Brachybacterium | 43668 | Bacteria | Bacteria | 457 | 4.34e-124 | NTclustered | gi|1442783620|gb|CP031356.1| | 556288 | g14826 | i0 | 99.209 | 265.370229007634 | 253 | 2 | 97 | 0 | 10 | 262 | 909190 | 909442 | Brachybacterium saurashtrense strain DSM 23186 chromosome, complete genome | blastn | 69527 | 457 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Dermabacteraceae | Brachybacterium | Brachybacterium saurashtrense |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;