RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA509429" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA509429 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
485187 485187 PRJNA509429_P_NODE_30781_length_220_cov_2.000000_g29953_i0 PRJNA509429 30781 220 2 4.4 Luteoviridae sp. 1955165 Viruses Viruses 189 1.42e-43   NTclustered gi|2171145498|gb|MZ218414.1| 1955165 g29953 i0 82.407 4.21818181818182 216 38 98 0 1 216 2162 1947 MAG: Luteoviridae sp. isolate 248-k141_241782 genomic sequence blastn 928 189 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Luteoviridae sp.
6863093 6863093 PRJNA509429_P_NODE_51766_length_150_cov_1.391304_g50938_i0 PRJNA509429 51766 150 1.391304 2.086956 Tolivirales sp. 2809914 Viruses Viruses 261 1.86e-65   NTclustered gi|2647549457|gb|OR843652.1| 2809914 g50938 i0 98 1 150 3 100 0 1 150 921 1070 Tolivirales sp. strain MR233-17E/2125 polyprotein, tombus P33-like protein, and structural protein genes, complete cds blastn 150 261 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
11964033 11964033 PRJNA509429_P_NODE_48110_length_158_cov_1.626016_g47282_i0 PRJNA509429 48110 158 1.626016 2.56910528 Norway luteo-like virus 4 2034334 Viruses Viruses 292 7.07e-75   NTclustered gi|1240393781|gb|MF141070.1| 2034334 g47282 i0 100 3.9620253164557 158 0 100 0 1 158 2048 2205 Norway luteo-like virus 4 isolate NOR/B1V/Tofte/2014 RNA-dependent RNA-polymerase and coat protein genes, complete cds blastn 626 292 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Norway luteo-like virus 4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;