contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA509429" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1760526 | 1760526 | PRJNA509429_P_NODE_46662_length_162_cov_0.881890_g45834_i0 | PRJNA509429 | 46662 | 162 | 0.88189 | 1.4286618 | Petrotoga mobilis | 69499 | Bacteria | Bacteria | 102 | 1.32e-17 | NTclustered | gi|160359135|gb|CP000879.1| | 403833 | g45834 | i0 | 81.967 | 2.48765432098765 | 122 | 20 | 75 | 2 | 39 | 159 | 580645 | 580765 | Petrotoga mobilis SJ95, complete genome | blastn | 403 | 102 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Petrotogales | Petrotogaceae | Petrotoga | Petrotoga mobilis | ||
| 3662036 | 3662036 | PRJNA509429_P_NODE_37983_length_188_cov_1.830065_g37155_i0 | PRJNA509429 | 37983 | 188 | 1.830065 | 3.4405222 | Truepera | 332248 | Bacteria | Bacteria | 255 | 1.14e-63 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g37155 | i0 | 91.444 | 108.627659574468 | 187 | 14 | 99 | 2 | 3 | 188 | 316 | 501 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 20422 | 255 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 3662060 | 3662060 | PRJNA509429_P_NODE_883_length_1379_cov_12.246280_g648_i0 | PRJNA509429 | 883 | 1379 | 12.24628 | 168.8762012 | Deinococcus | 1298 | Bacteria | Bacteria | 1496 | 0 | NTclustered | gi|16975048|pdb|1JZX|A | 1299 | g648 | i0 | 91.387 | 179.883248730964 | 1103 | 80 | 80 | 12 | 280 | 1377 | 412 | 1504 | Chain A, 23S rRNA | blastn | 248059 | 1496 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 4939054 | 4939054 | PRJNA509429_P_NODE_884_length_1379_cov_12.017857_g648_i1 | PRJNA509429 | 884 | 1379 | 12.017857 | 165.72624803 | Deinococcus | 1298 | Bacteria | Bacteria | 1530 | 0 | NTclustered | gi|16975048|pdb|1JZX|A | 1299 | g648 | i1 | 91.931 | 186.978245105149 | 1103 | 74 | 80 | 12 | 3 | 1100 | 1504 | 412 | Chain A, 23S rRNA | blastn | 257843 | 1530 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 6863016 | 6863016 | PRJNA509429_P_NODE_35566_length_197_cov_3.265432_g34738_i0 | PRJNA509429 | 35566 | 197 | 3.265432 | 6.43290104 | Deinococcus rubellus | 1889240 | Bacteria | Bacteria | 244 | 2.62e-60 | NTclustered | gi|2304456361|gb|CP104213.1| | 1889240 | g34738 | i0 | 89.637 | 333.324873096447 | 193 | 19 | 98 | 1 | 5 | 197 | 319864 | 320055 | Deinococcus rubellus strain Ant6 chromosome, complete genome | blastn | 65665 | 244 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus rubellus | ||
| 7488820 | 7488820 | PRJNA509429_P_NODE_11426_length_426_cov_2.360614_g10608_i0 | PRJNA509429 | 11426 | 426 | 2.360614 | 10.05621564 | Bacteria | 2 | Bacteria | Bacteria | 156 | 3.04e-33 | NTclustered | gi|2444120906|gb|CP115165.1| | 328692 | g10608 | i0 | 75.272 | 136.415492957746 | 368 | 70 | 83 | 18 | 1 | 354 | 715352 | 714992 | Deinococcus aquaticus strain PB-314 chromosome, complete genome | blastn | 58113 | 156 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aquaticus | ||
| 12589687 | 12589687 | PRJNA509429_P_NODE_12970_length_396_cov_4.426593_g12149_i0 | PRJNA509429 | 12970 | 396 | 4.4265930000000004 | 17.52930828 | Deinococcus | 1298 | Bacteria | Bacteria | 704 | 0 | NTclustered | gi|2264081587|gb|CP094462.1| | 1299 | g12149 | i0 | 98.737 | 128.065656565657 | 396 | 5 | 100 | 0 | 1 | 396 | 920293 | 919898 | Deinococcus radiodurans strain BRD125 chromosome 1, complete sequence | blastn | 50714 | 704 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 13864532 | 13864532 | PRJNA509429_P_NODE_17751_length_326_cov_6.783505_g16923_i0 | PRJNA509429 | 17751 | 326 | 6.783505 | 22.1142263 | Deinococcus | 1298 | Bacteria | Bacteria | 499 | 9.11e-137 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g16923 | i0 | 94.495 | 190.570552147239 | 327 | 13 | 99 | 5 | 1 | 324 | 3060799 | 3061123 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 62126 | 501 | 0.996007984031936 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 16413449 | 16413449 | PRJNA509429_P_NODE_1933_length_997_cov_12.888773_g648_i3 | PRJNA509429 | 1933 | 997 | 12.888773 | 128.50106681 | Deinococcus | 1298 | Bacteria | Bacteria | 1557 | 0 | NTclustered | gi|16975048|pdb|1JZX|A | 1299 | g648 | i3 | 94.89 | 316.880641925777 | 998 | 47 | 99 | 4 | 1 | 995 | 508 | 1504 | Chain A, 23S rRNA | blastn | 315930 | 1557 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 18962390 | 18962390 | PRJNA509429_P_NODE_39155_length_184_cov_1.342282_g38327_i0 | PRJNA509429 | 39155 | 184 | 1.342282 | 2.46979888 | Truepera | 332248 | Bacteria | Bacteria | 239 | 1.12e-58 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g38327 | i0 | 92.727 | 6.20652173913043 | 165 | 12 | 90 | 0 | 1 | 165 | 1736 | 1572 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 1142 | 239 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 19611319 | 19611319 | PRJNA509429_P_NODE_47696_length_159_cov_1.645161_g46868_i0 | PRJNA509429 | 47696 | 159 | 1.645161 | 2.61580599 | Deinococcus sp. KNUC1210 | 2917691 | Bacteria | Bacteria | 228 | 2.0399999999999996e-55 | NTclustered | gi|2197029603|gb|CP092190.1| | 2917691 | g46868 | i0 | 92.453 | 213.339622641509 | 159 | 12 | 100 | 0 | 1 | 159 | 1427368 | 1427526 | Deinococcus sp. KNUC1210 chromosome, complete genome | blastn | 33921 | 228 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. KNUC1210 | ||
| 20237215 | 20237215 | PRJNA509429_P_NODE_37676_length_189_cov_2.714286_g36848_i0 | PRJNA509429 | 37676 | 189 | 2.714286 | 5.13000054 | Truepera | 332248 | Bacteria | Bacteria | 174 | 3.32e-39 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g36848 | i0 | 91.406 | 737.931216931217 | 128 | 9 | 68 | 2 | 62 | 189 | 2842 | 2717 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 139469 | 174 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 22787787 | 22787787 | PRJNA509429_P_NODE_11998_length_414_cov_41.680739_g11179_i0 | PRJNA509429 | 11998 | 414 | 41.680739 | 172.55825946 | Deinococcus | 1298 | Bacteria | Bacteria | 621 | 2.4199999999999997e-173 | NTclustered | gi|145033|gb|M21413.1|DEIRGDA | 1299 | g11179 | i0 | 93.72 | 112.149758454106 | 414 | 26 | 100 | 0 | 1 | 414 | 493 | 906 | D.radiodurans 16S ribosomal RNA gene | blastn | 46430 | 627 | 0.990430622009569 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;