RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA509429" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Heunggongvirae · 4 ✖

bioproject 1

  • PRJNA509429 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6214225 6214225 PRJNA509429_P_NODE_13285_length_391_cov_1.691011_g12463_i0 PRJNA509429 13285 391 1.691011 6.61185301 root 1 Root_unresolved Root_unresolved 60.2 2.23e-4   NTclustered gi|1789282850|gb|MN075802.1| 10359 g12463 i0 100 9.08695652173913 32 0 8 0 360 391 211311 211280 Mutant Human betaherpesvirus 5 isolate TR3_BAC, complete sequence blastn 3553 60.2 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus humanbeta5
9413464 9413464 PRJNA509429_P_NODE_51348_length_151_cov_1.353448_g50520_i0 PRJNA509429 51348 151 1.353448 2.04370648 Maltschvirus maltsch 2956182 Viruses Viruses 102 1.21e-17   NTclustered gi|1839139225|emb|LR796188.1| 2100421 g50520 i0 100 0.735099337748344 55 0 36 0 31 85 166712 166766 uncultured Caudovirales phage genome assembly blastn 111 102 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
17062530 17062530 PRJNA509429_P_NODE_28574_length_233_cov_1.818182_g27746_i0 PRJNA509429 28574 233 1.818182 4.23636406 Maltschvirus maltsch 2956182 Viruses Viruses 167 7.14e-37   NTclustered gi|1839143214|emb|LR796235.1| 2100421 g27746 i0 82.54 0.811158798283262 189 33 81 0 1 189 266937 267125 uncultured Caudovirales phage genome assembly blastn 189 167 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
24062676 24062676 PRJNA509429_P_NODE_28059_length_236_cov_3.343284_g27231_i0 PRJNA509429 28059 236 3.343284 7.89015024 root 1 Root_unresolved Root_unresolved 193 1.1999999999999998e-44   NTclustered gi|1616967|gb|U38308.1|SCU38308 10364 g27231 i0 81.739 40.4491525423729 230 42 97 0 3 232 4407 4178 Simian cytomegalovirus major immediate early transcription unit IE94 blastn 9546 193 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus cercopithecinebeta5

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;