RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA508758" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA508758 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1760009 1760009 PRJNA508758_P_NODE_6902_length_886_cov_2.785978_g6065_i0 PRJNA508758 6902 886 2.785978 24.68376508 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 54.7 0.025   NTclustered gi|690652912|emb|LN201090.1| 99802 g6065 i0 92.105 0.0428893905191874 38 3 4 0 249 286 148 185 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0171086 blastn 38 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
5588413 5588413 PRJNA508758_P_NODE_4845_length_1107_cov_2.944874_g4250_i0 PRJNA508758 4845 1107 2.944874 32.59975518 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 630 1.1399999999999997e-175   NTclustered gi|1369885|gb|L78441.1|SCM14332R 6183 g4250 i0 85.455 7.59891598915989 605 88 79 0 331 935 605 1 Schistosoma mansoni 14-3-3-2 mRNA, 3' end of cds blastn 8412 630 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
5588546 5588546 PRJNA508758_P_NODE_6585_length_916_cov_6.512456_g5772_i0 PRJNA508758 6585 916 6.512456 59.65409696 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 73.1 7.1e-8   NTclustered gi|690677799|emb|LN229752.1| 99802 g5772 i0 92.308 6.50436681222707 52 2 5 2 765 814 476 425 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0042753 blastn 5958 73.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
11963401 11963401 PRJNA508758_P_NODE_49550_length_301_cov_1.785088_g48502_i0 PRJNA508758 49550 301 1.785088 5.37311488 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 442 1.4199999999999995e-119   NTclustered gi|1116517974|gb|AY485340.2| 6183 g48502 i0 96.617 327.468438538206 266 9 100 0 6 271 266 1 Schistosoma mansoni ubiquitin mRNA, partial cds blastn 98568 442 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
24710946 24710946 PRJNA508758_P_NODE_85400_length_243_cov_0.905882_g84352_i0 PRJNA508758 85400 243 0.905882 2.20129326 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 54.7 0.006   NTclustered gi|686667920|emb|LK404588.1| 57078 g84352 i0 100 0.119341563786008 29 0 12 0 131 159 29 1 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0011199 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
25337039 25337039 PRJNA508758_P_NODE_19080_length_461_cov_1.778351_g18033_i0 PRJNA508758 19080 461 1.778351 8.19819811 Tricladida 6159 Platyhelminthes Platyhelminthes 171 1.18e-37   NTclustered gi|109631049|gb|DQ665969.1| 56553 g18033 i0 76.524 57.1822125813449 328 68 70 7 6 330 1104 1425 Dugesia sicula 28S ribosomal RNA gene, partial sequence blastn 26361 171 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia sicula

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;