RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA508758" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA508758 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17062047 17062047 PRJNA508758_P_NODE_54934_length_288_cov_1.776744_g53886_i0 PRJNA508758 54934 288 1.776744 5.11702272 Mycotypha africana 64632 Fungi Fungi 52.8 0.027   NTclustered gi|2432566207|ref|XM_053078878.1| 64632 g53886 i0 100 0.0972222222222222 28 0 10 0 1 28 811 784 Mycotypha africana uncharacterized protein (BDF20DRAFT_835808), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
22161278 22161278 PRJNA508758_P_NODE_32818_length_357_cov_1.084507_g31770_i0 PRJNA508758 32818 357 1.084507 3.87168999 Mycotypha africana 64632 Fungi Fungi 209 1.9e-49   NTclustered gi|2432557083|ref|XM_053083021.1| 64632 g31770 i0 87.432 26.4733893557423 183 21 51 2 176 357 188 369 Mycotypha africana ATP synthase subunit alpha (BDF20DRAFT_904353), partial mRNA blastn 9451 209 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
25337055 25337055 PRJNA508758_P_NODE_28400_length_380_cov_1.003257_g27352_i0 PRJNA508758 28400 380 1.003257 3.8123766 Mucorales 4827 Fungi Fungi 63.9 1.67e-5   NTclustered gi|82398553|gb|DQ273817.1| 4846 g27352 i0 84.615 1.9 65 8 17 2 316 379 1660 1597 Rhizopus stolonifer isolate AFTOL-ID 632 28S ribosomal RNA gene, partial sequence blastn 722 63.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;